Paket: libjellyfish-2.0-dev (2.3.1-3 och andra)

[ Källkod: jellyfish  ]

count k-mers in DNA sequences (development files of jellyfish)

JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.

JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.

This package contains the development files (static library and header files)

Märken: Software Development: Bibliotek, Role: Development Library

Andra paket besläktade med libjellyfish-2.0-dev

• dep: libjellyfish-2.0-2 (= 2.3.0-12) [ia64]

  count k-mers in DNA sequences (dynamic library of jellyfish)

  dep: libjellyfish-2.0-2 (= 2.3.1-2+b1) [hppa]

  dep: libjellyfish-2.0-2 (= 2.3.1-3+b3) [amd64, arm64]

  dep: libjellyfish-2.0-2 (= 2.3.1-3+b4) [mips64el, ppc64el, riscv64]

Hämta libjellyfish-2.0-dev

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
amd64	2.3.1-3+b3	134,8 kbyte	691,0 kbyte	[filförteckning]
arm64	2.3.1-3+b3	132,8 kbyte	694,0 kbyte	[filförteckning]
hppa (inofficiell anpassning)	2.3.1-2+b1	134,3 kbyte	627,0 kbyte	[filförteckning]
ia64 (inofficiell anpassning)	2.3.0-12	150,5 kbyte	825,0 kbyte	[filförteckning]
mips64el	2.3.1-3+b4	140,4 kbyte	777,0 kbyte	[filförteckning]
ppc64el	2.3.1-3+b4	140,9 kbyte	725,0 kbyte	[filförteckning]
riscv64	2.3.1-3+b4	265,7 kbyte	2.255,0 kbyte	[filförteckning]