Paket: density-fitness (1.0.8-4 och andra)
Länkar för density-fitness
Debianresurser:
Hämta källkodspaketet density-fitness:
- [density-fitness_1.0.8-4.dsc]
- [density-fitness_1.0.8.orig.tar.gz]
- [density-fitness_1.0.8-4.debian.tar.xz]
Ansvariga:
Externa resurser:
- Hemsida [github.com]
Liknande paket:
Calculates per-residue electron density scores
The program density-fitness calculates electron density metrics, for main- (includes Cβ atom) and side-chain atoms of individual residues.
For this calculation, the program uses the structure model in either PDB or mmCIF format and the electron density from the 2mFo-DFc and mFo-DFc maps. If these maps are not readily available, the MTZ file and model can be used to calculate maps clipper. Density-fitness support both X-ray and electron diffraction data.
This program is essentially a reimplementation of edstats, a program available from the CCP4 suite. However, the output now contains only the RSR, SRSR and RSCC fields as in edstats with the addition of EDIAm and OPIA and no longer requires pre-calculated map coefficients.
Andra paket besläktade med density-fitness
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- dep: libboost-date-time1.83.0 (>= 1.83.0) [sparc64]
- set of date-time libraries based on generic programming concepts
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- dep: libboost-iostreams1.74.0 (>= 1.74.0) [hppa]
- Boost.Iostreams Library
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- dep: libboost-program-options1.74.0 (>= 1.74.0) [hppa]
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- dep: libboost-regex1.83.0-icu72 [sparc64]
- virtuellt paket som tillhandahålls av libboost-regex1.83.0
-
- dep: libc6 (>= 2.2) [hppa]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
- dep: libc6 (>= 2.34) [ej alpha, hppa, ia64, sh4]
- dep: libc6 (>= 2.37) [sh4]
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6.1-udeb
- dep: libc6.1 (>= 2.36) [ia64]
-
- dep: libccp4c0 (>= 8.0.0) [sparc64]
- CCP4 core functionality - C runtime
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- dep: libcifpp1 (>= 1.0.1) [hppa]
- Paketet inte tillgängligt
-
- dep: libcifpp5 (>= 5.0.7.1) [ej hppa]
- Library files for libcifpp
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- dep: libclipper2 (>= 2.1.20201109)
- object oriented library for crystallographic computing
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- dep: libgcc-s1 (>= 3.0) [ej armel, armhf, hppa, ia64, m68k]
- GCC stödbibliotek
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
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- dep: libgcc-s2 (>= 4.2.1) [m68k]
- GCC stödbibliotek
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- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC stödbibliotek
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- dep: libgsl27 (>= 2.7.1) [sparc64]
- GNU Scientific Library (GSL) -- library package
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- dep: libgslcblas0 (>= 2.7.1) [sparc64]
- GNU Scientific Library (GSL) -- blas library package
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- dep: libnewuoa0 (>= 0.1.2) [sparc64]
- Library file for libnewuoa
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- dep: libpdb-redo1 (>= 1.0.2-3~) [hppa]
- Paketet inte tillgängligt
-
- dep: libpdb-redo3 (>= 3.0.5) [ej hppa]
- Library file for libpdb-redo
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- dep: libstdc++6 (>= 11) [ej riscv64, sh4, sparc64]
- GNU standardbibliotek v3 för C++
- dep: libstdc++6 (>= 13.1) [riscv64, sh4, sparc64]
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- dep: libunwind8 [ia64]
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- dep: libzeep5.1 (>= 5.1.4) [hppa]
- Library file for libzeep
- dep: libzeep5.1 (>= 5.1.8) [ej hppa]
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- dep: zlib1g (>= 1:1.2.2) [ej hppa]
- Kompressionsbibliotek - körtidspaket
Hämta density-fitness
Arkitektur | Version | Paketstorlek | Installerad storlek | Filer |
---|---|---|---|---|
alpha (inofficiell anpassning) | 1.0.8-4 | 447,6 kbyte | 5.608,0 kbyte | [filförteckning] |
amd64 | 1.0.8-4 | 448,0 kbyte | 5.548,0 kbyte | [filförteckning] |
arm64 | 1.0.8-4 | 443,8 kbyte | 5.544,0 kbyte | [filförteckning] |
armel | 1.0.8-4 | 442,7 kbyte | 5.531,0 kbyte | [filförteckning] |
armhf | 1.0.8-4 | 443,1 kbyte | 5.503,0 kbyte | [filförteckning] |
hppa (inofficiell anpassning) | 1.0.0-4 | 104,9 kbyte | 359,0 kbyte | [filförteckning] |
i386 | 1.0.8-4 | 452,0 kbyte | 5.554,0 kbyte | [filförteckning] |
ia64 (inofficiell anpassning) | 1.0.8-4 | 461,7 kbyte | 5.675,0 kbyte | [filförteckning] |
m68k (inofficiell anpassning) | 1.0.8-4 | 444,3 kbyte | 5.542,0 kbyte | [filförteckning] |
mips64el | 1.0.8-4 | 447,9 kbyte | 5.615,0 kbyte | [filförteckning] |
ppc64 (inofficiell anpassning) | 1.0.8-4 | 449,3 kbyte | 5.610,0 kbyte | [filförteckning] |
ppc64el | 1.0.8-4 | 449,9 kbyte | 5.608,0 kbyte | [filförteckning] |
riscv64 | 1.0.8-4+b1 | 450,5 kbyte | 5.537,0 kbyte | [filförteckning] |
s390x | 1.0.8-4 | 444,2 kbyte | 5.556,0 kbyte | [filförteckning] |
sh4 (inofficiell anpassning) | 1.0.8-4 | 450,2 kbyte | 5.542,0 kbyte | [filförteckning] |
sparc64 (inofficiell anpassning) | 1.0.8-4+b1 | 443,8 kbyte | 6.445,0 kbyte | [filförteckning] |
x32 (inofficiell anpassning) | 1.0.8-4 | 446,8 kbyte | 5.535,0 kbyte | [filförteckning] |