Paket: abyss (2.1.5-7)

[ Källkod: abyss  ]

de novo, parallel, sequence assembler for short reads

ABySS is a de novo, parallel, sequence assembler that is designed for short reads. It may be used to assemble genome or transcriptome sequence data. Parallelization is achieved using MPI, OpenMP and pthread.

Märken: Field: Biologi, Implemented in: C, User Interface: Command Line, Role: Program

Andra paket besläktade med abyss

• dep: bsdmainutils

  collection of more utilities from FreeBSD

• dep: libc6 (>= 2.14) [amd64]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.28) [armhf, i386]

• dep: libgcc1 (>= 1:3.0) [amd64, arm64]

  GCC stödbibliotek

  dep: libgcc1 (>= 1:3.5) [armhf]

  dep: libgcc1 (>= 1:4.2) [i386]

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: libopenmpi3

  high performance message passing library -- shared library

• dep: libsqlite3-0 (>= 3.5.9)

  SQLite 3 shared library

• dep: libstdc++6 (>= 5.2)

  GNU standardbibliotek v3 för C++

• dep: make

  utility for directing compilation

• dep: openmpi-bin

  high performance message passing library -- binaries

• dep: openmpi-common

  high performance message passing library -- common files

• dep: perl

  Larry Wall's Practical Extraction and Report Language

Hämta abyss

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	2.885,5 kbyte	8.774,0 kbyte	[filförteckning]
arm64	2.716,8 kbyte	8.114,0 kbyte	[filförteckning]
armhf	2.724,5 kbyte	6.470,0 kbyte	[filförteckning]
i386	2.960,8 kbyte	9.334,0 kbyte	[filförteckning]