[ Källkod: libedlib ]
Paket: edlib-aligner (1.2.6-1)
Länkar för edlib-aligner
Debianresurser:
Hämta källkodspaketet libedlib:
Ansvariga:
Externa resurser:
- Hemsida [github.com]
Liknande paket:
edlib sequence alignment tool using edit distance
Edlib is a lightweight and super fast C/C++ library for sequence alignment using edit distance. This package provides an aligner using this library.
Features of libedlib
* Calculates edit distance (Levehnstein distance). * It can find optimal alignment path (instructions how to transform first sequence into the second sequence). * It can find just the start and/or end locations of alignment path - can be useful when speed is more important than having exact alignment path. * Supports multiple alignment methods: global(NW), prefix(SHW) and infix(HW), each of them useful for different scenarios. * You can extend character equality definition, enabling you to e.g. have wildcard characters, to have case insensitive alignment or to work with degenerate nucleotides. * It can easily handle small or very large sequences, even when finding alignment path, while consuming very little memory. * Super fast thanks to Myers's bit-vector algorithm.
Andra paket besläktade med edlib-aligner
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- dep: libc6 (>= 2.14) [amd64]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.4) [ej amd64, arm64, ppc64el]
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- dep: libedlib0 (= 1.2.6-1)
- library for sequence alignment using edit distance
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- dep: libgcc-s1 (>= 3.0) [ej armel, armhf]
- GCC stödbibliotek
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
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- dep: libstdc++6 (>= 5.2)
- GNU standardbibliotek v3 för C++
Hämta edlib-aligner
Arkitektur | Paketstorlek | Installerad storlek | Filer |
---|---|---|---|
amd64 | 22,3 kbyte | 65,0 kbyte | [filförteckning] |
arm64 | 21,3 kbyte | 57,0 kbyte | [filförteckning] |
armel | 19,0 kbyte | 52,0 kbyte | [filförteckning] |
armhf | 19,0 kbyte | 48,0 kbyte | [filförteckning] |
i386 | 22,3 kbyte | 64,0 kbyte | [filförteckning] |
mips64el | 21,2 kbyte | 62,0 kbyte | [filförteckning] |
mipsel | 21,7 kbyte | 61,0 kbyte | [filförteckning] |
ppc64el | 25,5 kbyte | 85,0 kbyte | [filförteckning] |
s390x | 20,9 kbyte | 61,0 kbyte | [filförteckning] |