Paket: blixem (4.44.1+dfsg-6 och andra)

[ Källkod: seqtools  ]

interactive browser of sequence alignments

Blixem is an interactive browser of sequence alignments that have been stacked up in a "master-slave" multiple alignment; it is not a 'true' multiple alignment but a 'one-to-many' alignment.

 * Overview section showing the positions of genes and alignments around
   the alignment window
 * Detail section showing the actual alignment of protein or nucleotide
   sequences to the genomic DNA sequence.
 * View alignments against both strands of the reference sequence.
 * View sequences in nucleotide or protein mode; in protein mode, Blixem
   will display the three-frame translation of the reference sequence.
 * Residues are highlighted in different colours depending on whether
   they are an exact match, conserved substitution or mismatch.
 * Gapped alignments are supported, with insertions and deletions being
   highlighted in the match sequence.
 * Matches can be sorted and filtered.
 * SNPs and other variations can be highlighted in the reference
   sequence.
 * Poly(A) tails can be displayed and poly(A) signals highlighted in the
   reference sequence.

Märken: Interface Toolkit: GTK

Andra paket besläktade med blixem

• dep: libc6 (>= 2.14) [amd64]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.7) [ej amd64, arm64, ppc64el]

• dep: libcairo2 (>= 1.2.4)

  Cairo 2D vector graphics library

• dep: libcurl4 (>= 7.16.2)

  easy-to-use client-side URL transfer library (OpenSSL flavour)

• dep: libgbtools0 (>= 4.44.1+dfsg)

  library for visualising sequence alignments

• dep: libgcc-s1 (>= 3.0) [ej armel, armhf]

  GCC stödbibliotek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libglib2.0-0 (>= 2.35.9)

  GLib library of C routines

• dep: libgtk2.0-0 (>= 2.14.0)

  GTK graphical user interface library - old version

• dep: libpango-1.0-0 (>= 1.14.0)

  Layout and rendering of internationalized text

• dep: libsqlite3-0 (>= 3.5.9)

  SQLite 3 shared library

• dep: libstdc++6 (>= 5.2)

  GNU standardbibliotek v3 för C++

Hämta blixem

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
amd64	4.44.1+dfsg-6+b1	1.358,0 kbyte	2.256,0 kbyte	[filförteckning]
arm64	4.44.1+dfsg-6+b1	1.320,3 kbyte	2.202,0 kbyte	[filförteckning]
armel	4.44.1+dfsg-6+b1	1.299,1 kbyte	2.072,0 kbyte	[filförteckning]
armhf	4.44.1+dfsg-6+b1	1.305,6 kbyte	1.820,0 kbyte	[filförteckning]
i386	4.44.1+dfsg-6+b1	1.372,7 kbyte	2.424,0 kbyte	[filförteckning]
mips64el	4.44.1+dfsg-6+b1	1.343,4 kbyte	2.639,0 kbyte	[filförteckning]
mipsel	4.44.1+dfsg-6+b1	1.349,7 kbyte	2.561,0 kbyte	[filförteckning]
ppc64el	4.44.1+dfsg-6+b1	1.358,2 kbyte	2.676,0 kbyte	[filförteckning]
s390x	4.44.1+dfsg-6+b1	1.321,3 kbyte	2.306,0 kbyte	[filförteckning]