Paket: ataqv (1.2.1+ds-1 och andra)

[ Källkod: ataqv  ]

ATAC-seq QC and visualization

A toolkit for measuring and comparing ATAC-seq results, made in the Parker lab at the University of Michigan. They wrote it to help understand how well their ATAC-seq assays had worked, and to make it easier to spot differences that might be caused by library prep or sequencing.

Märken: Interface Toolkit: Ncurses TUI

Andra paket besläktade med ataqv

• dep: fonts-font-awesome

  iconic font designed for use with Twitter Bootstrap

• dep: libboost-chrono1.74.0 (>= 1.74.0)

  C++ representation of time duration, time point, and clocks

• dep: libboost-filesystem1.74.0 (>= 1.74.0)

  filesystem operations (portable paths, iteration over directories, etc) in C++

• dep: libboost-iostreams1.74.0 (>= 1.74.0)

  Boost.Iostreams Library

• dep: libc6 (>= 2.14) [amd64]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.22) [ppc64el]

  dep: libc6 (>= 2.4) [ej amd64, arm64, ppc64el]

• dep: libgcc-s1 (>= 3.0) [amd64]

  GCC stödbibliotek

  dep: libgcc-s1 (>= 3.5) [armhf]

  dep: libgcc-s1 (>= 4.2) [i386, mipsel, ppc64el]

  dep: libgcc-s1 (>= 4.5) [arm64, mips64el]

• dep: libhts3 (>= 1.10)

  C library for high-throughput sequencing data formats

• dep: libjs-jquery

  JavaScript library for dynamic web applications

• dep: libjs-jquery-datatables

  jQuery plug-in that makes nice tables from different data sources

• dep: libjs-jquery-datatables-extensions

  extensions for the jQuery plug-in for tables from different data sources

• dep: libncurses6 (>= 6)

  shared libraries for terminal handling

• dep: libstdc++6 (>= 9)

  GNU standardbibliotek v3 för C++

• dep: node-d3

  Data-Driven Documents to visualize data

• dep: node-normalize.css

  Modern alternative to CSS resets

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• sug: macs

  Model-based Analysis of ChIP-Seq on short reads sequencers

• sug: picard-tools

  Command line tools to manipulate SAM and BAM files

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• sug: wget

  retrieves files from the web

Hämta ataqv

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
amd64	1.2.1+ds-1+b1	3.316,6 kbyte	6.500,0 kbyte	[filförteckning]
arm64	1.2.1+ds-1+b1	3.265,7 kbyte	6.364,0 kbyte	[filförteckning]
armhf	1.2.1+ds-1+b1	3.254,5 kbyte	5.850,0 kbyte	[filförteckning]
i386	1.2.1+ds-1+b1	3.351,7 kbyte	6.622,0 kbyte	[filförteckning]
mips64el	1.2.1+ds-1+b1	3.258,6 kbyte	6.904,0 kbyte	[filförteckning]
mipsel	1.2.1+ds-1+b1	3.272,6 kbyte	6.867,0 kbyte	[filförteckning]
ppc64el	1.2.1+ds-1+b1	3.305,9 kbyte	6.848,0 kbyte	[filförteckning]