Paket: r-cran-spp (1.16.0-2)

[ Källkod: r-cran-spp  ]

GNU R ChIP-seq processing pipeline

R package for anlaysis of ChIP-seq and other functional sequencing data

 * Assess overall DNA-binding signals in the data and select appropriate
   quality of tag alignment.
 * Discard or restrict positions with abnormally high number of tags.
 * Calculate genome-wide profiles of smoothed tag density and save them
   in WIG files for viewing in other browsers.
 * Calculate genome-wide profiles providing conservative statistical
   estimates of fold enrichment ratios along the genome. These can be
   exported for browser viewing, or thresholded to determine regions of
   significant enrichment/depletion.
 * Determine statistically significant point binding positions
 * Assess whether the set of point binding positions detected at a
   current sequencing depth meets saturation criteria, and if does not,
   estimate what sequencing depth would be required to do so.

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Hämta r-cran-spp

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	315,3 kbyte	453,0 kbyte	[filförteckning]
arm64	309,7 kbyte	425,0 kbyte	[filförteckning]
armel	309,8 kbyte	424,0 kbyte	[filförteckning]
armhf	309,5 kbyte	391,0 kbyte	[filförteckning]
i386	320,8 kbyte	459,0 kbyte	[filförteckning]
mips64el	308,7 kbyte	452,0 kbyte	[filförteckning]
mipsel	308,6 kbyte	454,0 kbyte	[filförteckning]
ppc64el	317,2 kbyte	497,0 kbyte	[filförteckning]
s390x	311,0 kbyte	444,0 kbyte	[filförteckning]