Paket: r-bioc-bsseq (1.34.0+dfsg-4)

[ Källkod: r-bioc-bsseq  ]

Bioconductor analyze, manage and store bisulfite sequencing data

A collection of tools for analyzing and visualizing bisulfite sequencing data.

Andra paket besläktade med r-bioc-bsseq

• dep: libc6 (>= 2.17)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC stödbibliotek

• dep: libstdc++6 (>= 11)

  GNU standardbibliotek v3 för C++

• dep: r-api-4.0

  virtuellt paket som tillhandahålls av r-base-core

• dep: r-api-bioc-3.16

  virtuellt paket som tillhandahålls av r-bioc-biocgenerics

• dep: r-base-core (>= 4.2.2.20221110-1)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-beachmat

  I/O for several formats storing matrix data

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-biocgenerics

  generic functions for Bioconductor

• dep: r-bioc-biocparallel

  BioConductor facilities for parallel evaluation

• dep: r-bioc-biostrings

  GNU R string objects representing biological sequences

• dep: r-bioc-bsgenome

  BioConductor infrastructure for Biostrings-based genome data packages

• dep: r-bioc-delayedarray (>= 0.15.16)

  BioConductor delayed operations on array-like objects

• dep: r-bioc-delayedmatrixstats (>= 1.5.2)

  Functions on Rows and Columns of 'DelayedMatrix' Objects

• dep: r-bioc-genomeinfodb

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicranges (>= 1.41.5)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-hdf5array (>= 1.19.11)

  HDF5 backend for DelayedArray objects

• dep: r-bioc-iranges (>= 2.23.9)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-limma

  linear models for microarray data

• dep: r-bioc-rhdf5

  BioConductor HDF5 interface to R

• dep: r-bioc-s4vectors (>= 0.27.12)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment (>= 1.19.5)

  BioConductor assay container

• dep: r-cran-data.table (>= 1.11.8)

  GNU R extension of Data.frame

• dep: r-cran-gtools

  GNU R package with R programming tools by Greg Warnes et al

• dep: r-cran-locfit

  GNU R local regression, likelihood and density estimation

• dep: r-cran-permute

  R functions for generating restricted permutations of data

• dep: r-cran-r.utils (>= 2.0.0)

  GNU R various programming utilities

• dep: r-cran-rcpp

  GNU R package for Seamless R and C++ Integration

• dep: r-cran-scales

  Scale functions for visualization

• sug: r-bioc-beachmat (>= 1.5.2)

  I/O for several formats storing matrix data

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-rtracklayer

  GNU R interface to genome browsers and their annotation tracks

• sug: r-cran-batchjobs

  GNU R batch computing

• sug: r-cran-doparallel

  GNU R foreach parallel adaptor for the parallel package

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-matrix

  GNU R package of classes for dense and sparse matrices

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-testthat

  GNU R testsuite

Hämta r-bioc-bsseq

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
ppc64el	2.882,1 kbyte	3.546,0 kbyte	[filförteckning]