Paket: clustalw (2.1+lgpl-7)

[ Källkod: clustalw  ]

global multiple nucleotide or peptide sequence alignment

This program performs an alignment of multiple nucleotide or amino acid sequences. It recognizes the format of input sequences and whether the sequences are nucleic acid (DNA/RNA) or amino acid (proteins). The output format may be selected from in various formats for multiple alignments such as Phylip or FASTA. Clustal W is very well accepted.

The output of Clustal W can be edited manually but preferably with an alignment editor like SeaView or within its companion Clustal X. When building a model from your alignment, this can be applied for improved database searches. The Debian package hmmer creates such in form of an HMM.

Märken: Biologi: Clustal/ALN, Proteiner, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c++, interface::commandline, User Interface: Text-based Interactive, Role: role::program, scope::utility, Purpose: Comparing, Supports Format: works-with-format::plaintext, works-with::TODO

Andra paket besläktade med clustalw

• dep: libc6 (>= 2.29)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libgcc-s1 (>= 3.0) [ej armel, armhf]

  GCC stödbibliotek

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 5.2)

  GNU standardbibliotek v3 för C++

• sug: clustalx

  Multiple alignment of nucleic acid and protein sequences (graphical interface)

• sug: seaview

  Multiplatform interface for sequence alignment and phylogeny

• enh: bioperl-run

  BioPerl wrappers: scripts

• enh: emboss

  European molecular biology open software suite

• enh: t-coffee

  Multiple Sequence Alignment

Hämta clustalw

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	275,1 kbyte	787,0 kbyte	[filförteckning]
arm64	241,9 kbyte	710,0 kbyte	[filförteckning]
armel	240,2 kbyte	718,0 kbyte	[filförteckning]
armhf	249,6 kbyte	542,0 kbyte	[filförteckning]
i386	294,8 kbyte	834,0 kbyte	[filförteckning]
mips64el	259,1 kbyte	941,0 kbyte	[filförteckning]
mipsel	258,4 kbyte	912,0 kbyte	[filförteckning]
ppc64el	276,5 kbyte	918,0 kbyte	[filförteckning]
s390x	247,5 kbyte	794,0 kbyte	[filförteckning]