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[ Source: varscan  ]

Package: varscan (2.4.3+dfsg-1) [non-free]

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variant detection in next-generation sequencing data

Variant detection in massively parallel sequencing. For one sample, calls SNPs, indels, and consensus genotypes. For tumor-normal pairs, further classifies each variant as Germline, Somatic, or LOH, and also detects somatic copy number changes.

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Architecture Package Size Installed Size Files
amd64 136.3 kB162.0 kB [list of files]