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Package: poa (2.0+20060928-4 and others)

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Partial Order Alignment for multiple sequence alignment

POA is Partial Order Alignment, a fast program for multiple sequence alignment (MSA) in bioinformatics. Its advantages are speed, scalability, sensitivity, and the superior ability to handle branching / indels in the alignment. Partial order alignment is an approach to MSA, which can be combined with existing methods such as progressive alignment. POA optimally aligns a pair of MSAs and which therefore can be applied directly to progressive alignment methods such as CLUSTAL. For large alignments, Progressive POA is 10-30 times faster than CLUSTALW.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: scope::utility, works-with-format::plaintext, Works with: Need an extra tag

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Download poa

Download for all available architectures
Architecture Version Package Size Installed Size Files
amd64 2.0+20060928-4+b1 44.3 kB141.0 kB [list of files]
arm64 2.0+20060928-4+b1 39.5 kB149.0 kB [list of files]
armel 2.0+20060928-4+b1 42.8 kB152.0 kB [list of files]
armhf 2.0+20060928-4+b1 42.5 kB116.0 kB [list of files]
i386 2.0+20060928-4+b1 41.0 kB128.0 kB [list of files]
mips 2.0+20060928-4+b1 38.0 kB168.0 kB [list of files]
mips64el 2.0+20060928-4+b1 39.2 kB177.0 kB [list of files]
mipsel 2.0+20060928-4+b1 38.6 kB168.0 kB [list of files]
ppc64el 2.0+20060928-4+b1 39.5 kB169.0 kB [list of files]
s390x 2.0+20060928-4+b1 44.2 kB173.0 kB [list of files]