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[ Source: clustalw  ]

Package: clustalw (2.1+lgpl-5)

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global multiple nucleotide or peptide sequence alignment

This program performs an alignment of multiple nucleotide or amino acid sequences. It recognizes the format of input sequences and whether the sequences are nucleic acid (DNA/RNA) or amino acid (proteins). The output format may be selected from in various formats for multiple alignments such as Phylip or FASTA. Clustal W is very well accepted.

The output of Clustal W can be edited manually but preferably with an alignment editor like SeaView or within its companion Clustal X. When building a model from your alignment, this can be applied for improved database searches. The Debian package hmmer creates such in form of an HMM.

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c++, interface::commandline, User Interface: Text-based Interactive, Role: role::program, scope::utility, Purpose: Comparing, Supports Format: works-with-format::plaintext, works-with::TODO

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Download for all available architectures
Architecture Package Size Installed Size Files
amd64 279.1 kB782.0 kB [list of files]
arm64 249.0 kB737.0 kB [list of files]
armel 239.0 kB701.0 kB [list of files]
armhf 247.3 kB533.0 kB [list of files]
i386 290.0 kB821.0 kB [list of files]
mips 260.7 kB947.0 kB [list of files]
mips64el 266.2 kB975.0 kB [list of files]
mipsel 265.5 kB951.0 kB [list of files]
ppc64el 269.6 kB917.0 kB [list of files]
s390x 269.0 kB881.0 kB [list of files]