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Package: melting (4.3c-2)

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compute the melting temperature of nucleic acid duplex

This program computes, for a nucleic acid duplex, the enthalpy, the entropy and the melting temperature of the helix-coil transitions. Three types of hybridisation are possible: DNA/DNA, DNA/RNA, and RNA/RNA. The program first computes the hybridisation enthalpy and entropy from the elementary parameters of each Crick's pair by the nearest-neighbor method. Then the melting temperature is computed. The set of thermodynamic parameters can be easily changed, for instance following an experimental breakthrough.

Tags: Biology: Nucleic Acids, Field: Biology, field::biology:molecular, implemented-in::c, User Interface: Command Line, Role: role::program, scope::utility, Purpose: Analysing, Supports Format: works-with-format::plaintext, works-with::TODO

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Download for all available architectures
Architecture Package Size Installed Size Files
amd64 634.4 kB826.0 kB [list of files]
armel 635.2 kB826.0 kB [list of files]
armhf 632.6 kB815.0 kB [list of files]
i386 631.9 kB825.0 kB [list of files]
ia64 643.7 kB870.0 kB [list of files]
kfreebsd-amd64 632.7 kB775.0 kB [list of files]
kfreebsd-i386 630.8 kB773.0 kB [list of files]
mips 633.4 kB824.0 kB [list of files]
mipsel 630.7 kB824.0 kB [list of files]
powerpc 632.1 kB822.0 kB [list of files]
s390 632.1 kB824.0 kB [list of files]
s390x 632.8 kB828.0 kB [list of files]
sparc 633.7 kB824.0 kB [list of files]