Package: density-fitness (1.0.8-4)

[ Source: density-fitness  ]

Calculates per-residue electron density scores

The program density-fitness calculates electron density metrics, for main- (includes Cβ atom) and side-chain atoms of individual residues.

For this calculation, the program uses the structure model in either PDB or mmCIF format and the electron density from the 2mFo-DFc and mFo-DFc maps. If these maps are not readily available, the MTZ file and model can be used to calculate maps clipper. Density-fitness support both X-ray and electron diffraction data.

This program is essentially a reimplementation of edstats, a program available from the CCP4 suite. However, the output now contains only the RSR, SRSR and RSCC fields as in edstats with the addition of EDIAm and OPIA and no longer requires pre-calculated map coefficients.

Other Packages Related to density-fitness

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libcifpp5 (>= 5.0.7.1)

  Library files for libcifpp

• dep: libclipper2 (>= 2.1.20201109)

  object oriented library for crystallographic computing

• dep: libgcc-s1 (>= 3.0) [not armel, armhf]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libpdb-redo3 (>= 3.0.5)

  Library file for libpdb-redo

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: libzeep5.1 (>= 5.1.8)

  Library file for libzeep

• dep: zlib1g (>= 1:1.2.2)

  compression library - runtime

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Architecture	Package Size	Installed Size	Files
amd64	448.0 kB	5,548.0 kB	[list of files]
arm64	443.8 kB	5,544.0 kB	[list of files]
armel	442.7 kB	5,531.0 kB	[list of files]
armhf	443.1 kB	5,503.0 kB	[list of files]
i386	452.0 kB	5,554.0 kB	[list of files]
mips64el	447.9 kB	5,615.0 kB	[list of files]
mipsel	447.8 kB	5,613.0 kB	[list of files]
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s390x	444.2 kB	5,556.0 kB	[list of files]