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[ Source: samtools  ]

Package: samtools (0.1.12a-1~bpo60+1) [backports]

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processing sequence alignments in SAM and BAM formats

Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) format, does sorting, merging and indexing, and allows to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM (not SAM) file on a remote FTP or HTTP server.

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Download for all available architectures
Architecture Package Size Installed Size Files
amd64 541.0 kB992.0 kB [list of files]
i386 533.9 kB976.0 kB [list of files]
ia64 664.7 kB1,564.0 kB [list of files]
kfreebsd-amd64 541.0 kB942.0 kB [list of files]
kfreebsd-i386 534.1 kB924.0 kB [list of files]
mips 565.5 kB1,116.0 kB [list of files]
mipsel 571.6 kB1,116.0 kB [list of files]
powerpc 547.8 kB1,004.0 kB [list of files]
s390 555.0 kB1,032.0 kB [list of files]