Balík: python3-biopython (1.83+dfsg1-2)

[ Zdroj: python-biopython  ]

Python3 library for bioinformatics

The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology.

It is a distributed collaborative effort to develop Python3 libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. The project works along with the Open Bioinformatics Foundation, who generously provide web and CVS space for the project.

Ostatné balíky súvisiace s balíkom python3-biopython

• dep: libc6 (>= 2.27)

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6-udeb

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.13)

  dep: python3 (>= 3.11~)

• dep: python3-numpy (>= 1:1.25.0)

  Fast array facility to the Python language (Python 3)

• dep: python3-numpy-abi9

  virtuálny balík poskytovaný balíkom python3-numpy

• dep: python3-reportlab (>= 4.0.4-1~)

  knižnica ReportLab na tvorbu dokumentov PDF pomocou Pythonu

• dep: w3c-sgml-lib

  w3.org DTD and catalog files

• rec: ncbi-blast+ (>= 2.10.1-3)

  next generation suite of BLAST sequence search tools

• rec: python-biopython-doc (= 1.83+dfsg1-2)

  Documentation for the Biopython library

• sug: bwa

  Burrows-Wheeler Aligner

• sug: clustalo

  General-purpose multiple sequence alignment program for proteins

• sug: clustalw

  globálne viacnásobné zarovnávanie sekvencií nukleotidov alebo peptidov

• sug: dialign

  Segment-based multiple sequence alignment

• sug: dssp

  protein secondary structure assignment based on 3D structure

• sug: emboss

  európsky balík otvoreného softvéru pre molekulárnu biológiu

• sug: fasttree

  phylogenetic trees from alignments of nucleotide or protein sequences

• sug: mafft

  Multiple alignment program for amino acid or nucleotide sequences

• sug: muscle3

  multiple alignment program of protein sequences

• sug: phylip

  package of programs for inferring phylogenies

• sug: phyml

  Phylogenetic estimation using Maximum Likelihood

• sug: prank

  Probabilistic Alignment Kit for DNA, codon and amino-acid sequences

• sug: probcons

  PROBabilistic CONSistency-based multiple sequence alignment

• sug: python3-matplotlib

  systém v Pythone na vykresľovanie v štýle podobnom Matlabu - Python 3

• sug: python3-mmtf

  binary encoding of biological structures (Python 3)

• sug: python3-mysqldb

  rozhranie jazyka Python k MySQL

• sug: python3-pil

  Python Imaging Library - Python3

• sug: python3-psycopg2

  modul PostgreSQL pre Python 3

• sug: python3-rdflib

  knižnica jazyka Python 3 obsahujúca RDF triple store a syntaktické analyzátory a serializátory RDF

• sug: python3-scipy

  vedecké nástroje pre Python 3

• sug: python3-tk

  Tkinter - písanie aplikácií Tk v jazyku Python 3.x

• sug: raxml

  Randomized Axelerated Maximum Likelihood of phylogenetic trees

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• sug: t-coffee

  Multiple Sequence Alignment

• sug: wise

  comparison of biopolymers, like DNA and protein sequences

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