Balík: parallel-fastq-dump (0.6.7-3)

[ Zdroj: parallel-fastq-dump  ]

parallel fastq-dump wrapper

NCBI fastq-dump can be very slow sometimes, even if you have the resources (network, IO, CPU) to go faster, even if you already downloaded the sra file. This tool speeds up the process by dividing the work into multiple threads.

This is possible because fastq-dump have options (-N and -X) to query specific ranges of the sra file, this tool works by dividing the work into the requested number of threads, running multiple fastq-dump in parallel and concatenating the results back together, as if you had just executed a plain fastq-dump call.

Ostatné balíky súvisiace s balíkom parallel-fastq-dump

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: sra-toolkit

  utilities for the NCBI Sequence Read Archive

Stiahnuť parallel-fastq-dump

Stiahnuť pre všetky dostupné architektúry

Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
amd64	5.5 kB	24.0 kB	[zoznam súborov]
arm64	5.5 kB	24.0 kB	[zoznam súborov]
x32 (neoficiálny port)	5.5 kB	24.0 kB	[zoznam súborov]