Balík: libfastahack0 (1.0.0+dfsg-11) [debports]

[ Zdroj:  ]

library for indexing and sequence extraction from FASTA files (lib)

fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use.

Features:

 * FASTA index (.fai) generation for FASTA files
 * Sequence extraction
 * Subsequence extraction
 * Sequence statistics (currently only entropy is provided)

Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence.

This package contains the dynamic library.

Ostatné balíky súvisiace s balíkom libfastahack0

• dep: libc6.1 (>= 2.33)

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6.1-udeb

• dep: libgcc-s1 (>= 3.4)

  podporná knižnica GCC

• dep: libstdc++6 (>= 13.1)

  štandardná knižnica C++ GNU v3

Stiahnuť libfastahack0

Stiahnuť pre všetky dostupné architektúry

Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
alpha (neoficiálny port)	23.7 kB	82.0 kB	[zoznam súborov]