Balík: quorum (1.1.1-4)

[ Zdroj: quorum  ]

QUality Optimized Reads of genomic sequences

QuorUM enables to obtain trimmed and error-corrected reads that result in assemblies with longer contigs and fewer errors. QuorUM provides best performance compared to other published error correctors in several metrics. QuorUM is efficiently implemented making use of current multi- core computing architectures and it is suitable for large data sets (1 billion bases checked and corrected per day per core). The third-party assembler (SOAPdenovo) benefits significantly from using QuorUM error- corrected reads. QuorUM error corrected reads result in a factor of 1.1 to 4 improvement in N50 contig size compared to using the original reads with SOAPdenovo for the data sets investigated.

Ostatné balíky súvisiace s balíkom quorum

• dep: libc6 (>= 2.29)

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  podporná knižnica GCC

• dep: libjellyfish-2.0-2 (>= 2.3.0)

  count k-mers in DNA sequences (dynamic library of jellyfish)

• dep: libstdc++6 (>= 9)

  štandardná knižnica C++ GNU v3

Stiahnuť quorum

Stiahnuť pre všetky dostupné architektúry

Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
amd64	111.8 kB	393.0 kB	[zoznam súborov]
arm64	105.6 kB	365.0 kB	[zoznam súborov]
mips64el	112.5 kB	436.0 kB	[zoznam súborov]
ppc64el	114.4 kB	549.0 kB	[zoznam súborov]