Balík: libfastahack0 (1.0.0+dfsg-7)

[ Zdroj: libfastahack  ]

library for indexing and sequence extraction from FASTA files (lib)

fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use.

Features:

 * FASTA index (.fai) generation for FASTA files
 * Sequence extraction
 * Subsequence extraction
 * Sequence statistics (currently only entropy is provided)

Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence.

This package contains the dynamic library.

Značky: Role: Shared Library

Ostatné balíky súvisiace s balíkom libfastahack0

• dep: libc6 (>= 2.14) [amd64]

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [nie amd64, arm64, ppc64el]

• dep: libgcc-s1 (>= 3.0) [nie armel, armhf]

  podporná knižnica GCC

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 5.2)

  štandardná knižnica C++ GNU v3

Stiahnuť libfastahack0

Stiahnuť pre všetky dostupné architektúry

Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
amd64	25.0 kB	83.0 kB	[zoznam súborov]
arm64	23.1 kB	75.0 kB	[zoznam súborov]
armel	23.3 kB	69.0 kB	[zoznam súborov]
armhf	23.7 kB	57.0 kB	[zoznam súborov]
i386	27.4 kB	81.0 kB	[zoznam súborov]
mips64el	24.3 kB	82.0 kB	[zoznam súborov]
mipsel	25.0 kB	79.0 kB	[zoznam súborov]
ppc64el	26.3 kB	87.0 kB	[zoznam súborov]
s390x	22.8 kB	77.0 kB	[zoznam súborov]