all options
jessie  ] [  stretch  ] [  buster  ] [  sid  ]
[ Source: tree-puzzle  ]

Package: tree-puzzle (5.2-11)

Links for tree-puzzle

Screenshot

Debian Resources:

Download Source Package tree-puzzle:

Maintainers:

External Resources:

Similar packages:

Reconstruction of phylogenetic trees by maximum likelihood

TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that implements a fast tree search algorithm, quartet puzzling, that allows analysis of large data sets and automatically assigns estimations of support to each internal branch. TREE-PUZZLE also computes pairwise maximum likelihood distances as well as branch lengths for user specified trees. Branch lengths can also be calculated under the clock-assumption. In addition, TREE-PUZZLE offers a novel method, likelihood mapping, to investigate the support of a hypothesized internal branch without computing an overall tree and to visualize the phylogenetic content of a sequence alignment.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, use::comparing, Supports Format: Plain Text, Works with: Need an extra tag

Other Packages Related to tree-puzzle

  • depends
  • recommends
  • suggests
  • enhances

Download tree-puzzle

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 136.3 kB362.0 kB [list of files]
amd64 132.9 kB313.0 kB [list of files]
arm64 127.1 kB317.0 kB [list of files]
armel 128.8 kB325.0 kB [list of files]
armhf 121.2 kB241.0 kB [list of files]
hppa (unofficial port) 126.4 kB314.0 kB [list of files]
hurd-i386 134.5 kB333.0 kB [list of files]
i386 134.3 kB333.0 kB [list of files]
kfreebsd-amd64 133.5 kB313.0 kB [list of files]
kfreebsd-i386 134.2 kB329.0 kB [list of files]
m68k (unofficial port) 122.2 kB321.0 kB [list of files]
mips 131.8 kB353.0 kB [list of files]
mips64el 133.8 kB368.0 kB [list of files]
mipsel 133.5 kB353.0 kB [list of files]
powerpcspe (unofficial port) 130.6 kB361.0 kB [list of files]
ppc64 (unofficial port) 141.3 kB426.0 kB [list of files]
ppc64el 139.7 kB362.0 kB [list of files]
s390x 125.0 kB333.0 kB [list of files]
sh4 (unofficial port) 146.1 kB302.0 kB [list of files]
sparc64 (unofficial port) 122.4 kB339.0 kB [list of files]
x32 (unofficial port) 130.3 kB297.0 kB [list of files]