Package: topp (2.6.0+cleaned1-4 and others)

[ Source: openms  ]

set of programs implementing The OpenMS Proteomic Pipeline

TOPP (the OpenMS proteomic pipeline) is a pipeline for the analysis of HPLC/MS data. It consists of a set of numerous small applications that can be chained together to create analysis pipelines tailored for a specific problem. The applications make use of the libopenms library. Some examples of these applications are :

  - TOPPView: A viewer for mass spectrometry data.
  - TOPPAS: An assistant for GUI-driven TOPP workflow design.
  - DTAExtractor: Extracts spectra of an MS run file to several
    files in DTA format.
  - FileConverter:  Converts between different MS file formats.
  - FileFilter: Extracts or manipulates portions of data from peak,
    feature or consensus feature files.
  - SpectraMerger: Merges spectra from an LC/MS map, either by
    precursor or by RT blocks.
  - BaselineFilter: Removes the baseline from profile spectra using a
    top-hat filter.
  - InternalCalibration: Applies an internal calibration.
  - PTModel: Trains a model for the prediction of proteotypic
    peptides from a training set.
  - RTPredict: Predicts retention times for peptides using a model
    trained by RTModel.
  - ExecutePipeline: Executes workflows created by TOPPAS.

Tags: Interface Toolkit: Qt

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Download topp

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2.6.0+cleaned1-3+b5	2,978.8 kB	22,869.0 kB	[list of files]
amd64	2.6.0+cleaned1-4+b2	3,112.9 kB	17,628.0 kB	[list of files]
arm64	2.6.0+cleaned1-4+b2	2,732.6 kB	20,932.0 kB	[list of files]
hppa (unofficial port)	2.6.0+cleaned1-4	3,070.1 kB	17,182.0 kB	[list of files]
i386	2.6.0+cleaned1-4+b2	3,287.9 kB	16,997.0 kB	[list of files]
ia64 (unofficial port)	2.6.0+cleaned1-4	3,752.2 kB	29,894.0 kB	[list of files]
m68k (unofficial port)	2.6.0+cleaned1-3+b3	3,171.2 kB	17,072.0 kB	[list of files]
mips64el	2.6.0+cleaned1-4+b2	2,730.4 kB	23,327.0 kB	[list of files]
ppc64 (unofficial port)	2.6.0+cleaned1-4+b2	3,118.1 kB	25,800.0 kB	[list of files]
ppc64el	2.6.0+cleaned1-4+b2	3,078.7 kB	24,069.0 kB	[list of files]
riscv64	2.6.0+cleaned1-4+b2	3,083.5 kB	14,316.0 kB	[list of files]
s390x	2.6.0+cleaned1-4+b2	3,072.6 kB	17,560.0 kB	[list of files]
sparc64 (unofficial port)	2.6.0+cleaned1-4+b2	3,340.0 kB	184,771.0 kB	[list of files]
x32 (unofficial port)	2.6.0+cleaned1-4	3,027.2 kB	15,324.0 kB	[list of files]