Package: python3-cyvcf2 (0.30.28-1 and others)
Links for python3-cyvcf2
Debian Resources:
Download Source Package cyvcf2:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Steffen Moeller (QA Page)
- Liubov Chuprikova (QA Page)
External Resources:
- Homepage [github.com]
Similar packages:
VCF parser based on htslib (Python 3)
This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.
cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.
This package installs the library for Python 3.
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Download python3-cyvcf2
Architecture | Version | Package Size | Installed Size | Files |
---|---|---|---|---|
alpha (unofficial port) | 0.30.28-1+b1 | 934.7 kB | 5,724.0 kB | [list of files] |
amd64 | 0.30.28-1+b1 | 983.3 kB | 5,499.0 kB | [list of files] |
arm64 | 0.30.28-1+b1 | 924.4 kB | 5,461.0 kB | [list of files] |
armel | 0.30.28-1+b1 | 923.8 kB | 5,333.0 kB | [list of files] |
armhf | 0.30.28-1+b1 | 934.2 kB | 4,981.0 kB | [list of files] |
hppa (unofficial port) | 0.30.28-1+b1 | 939.7 kB | 5,946.0 kB | [list of files] |
i386 | 0.30.28-1+b1 | 986.4 kB | 5,559.0 kB | [list of files] |
ia64 (unofficial port) | 0.30.28-1+b1 | 1,027.9 kB | 6,797.0 kB | [list of files] |
m68k (unofficial port) | 0.30.28-1+b1 | 585.0 kB | 4,329.0 kB | [list of files] |
mips64el | 0.30.28-1+b1 | 883.5 kB | 5,557.0 kB | [list of files] |
ppc64 (unofficial port) | 0.30.28-1+b1 | 954.3 kB | 5,909.0 kB | [list of files] |
ppc64el | 0.30.28-1+b1 | 962.8 kB | 5,781.0 kB | [list of files] |
riscv64 | 0.30.28-1+b1 | 978.0 kB | 5,193.0 kB | [list of files] |
s390x | 0.30.28-1+b1 | 946.8 kB | 5,501.0 kB | [list of files] |
sh4 (unofficial port) | 0.30.28-1+b1 | 732.4 kB | 4,243.0 kB | [list of files] |
sparc64 (unofficial port) | 0.30.28-1+b1 | 885.5 kB | 6,243.0 kB | [list of files] |
x32 (unofficial port) | 0.30.22-1 | 790.1 kB | 4,649.0 kB | [list of files] |