Package: python3-edlib (1.2.7-5)

[ Source: libedlib  ]

library for sequence alignment using edit distance (Python3 module)

A lightweight and super fast C/C++ library for sequence alignment using edit distance.

Calculating edit distance of two strings is as simple as:

 edlibAlign("hello", 5, "world!", 6,
            edlibDefaultAlignConfig()).editDistance;

Features

 * Calculates edit distance (Levehnstein distance).
 * It can find optimal alignment path (instructions how to transform
   first sequence into the second sequence).
 * It can find just the start and/or end locations of alignment path -
   can be useful when speed is more important than having exact
   alignment path.
 * Supports multiple alignment methods: global(NW), prefix(SHW) and
   infix(HW), each of them useful for different scenarios.
 * You can extend character equality definition, enabling you to e.g.
   have wildcard characters, to have case insensitive alignment or to
   work with degenerate nucleotides.
 * It can easily handle small or very large sequences, even when finding
   alignment path, while consuming very little memory.
 * Super fast thanks to Myers's bit-vector algorithm.

This package contains the Python3 module.

Other Packages Related to python3-edlib

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.16) [x32]

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.2) [hppa]

  dep: libc6 (>= 2.27) [riscv64]

  dep: libc6 (>= 2.37) [sh4]

  dep: libc6 (>= 2.4) [armel, armhf, i386, m68k, mips64el, ppc64, s390x, sparc64]

• dep: libc6.1 (>= 2.1.3) [alpha]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgcc-s1 (>= 3.0) [not armel, armhf, hppa, ia64, m68k]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support library

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: python3 (<< 3.13)

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (>= 3.11~)

Download python3-edlib

Download for all available architectures

Architecture	Package Size	Installed Size	Files
alpha (unofficial port)	89.1 kB	417.0 kB	[list of files]
amd64	96.8 kB	341.0 kB	[list of files]
arm64	84.2 kB	413.0 kB	[list of files]
armel	81.0 kB	297.0 kB	[list of files]
armhf	84.4 kB	225.0 kB	[list of files]
hppa (unofficial port)	92.8 kB	339.0 kB	[list of files]
i386	99.9 kB	349.0 kB	[list of files]
ia64 (unofficial port)	108.5 kB	604.0 kB	[list of files]
m68k (unofficial port)	89.7 kB	313.0 kB	[list of files]
mips64el	88.3 kB	423.0 kB	[list of files]
ppc64 (unofficial port)	95.4 kB	413.0 kB	[list of files]
ppc64el	98.1 kB	413.0 kB	[list of files]
riscv64	97.1 kB	269.0 kB	[list of files]
s390x	98.1 kB	369.0 kB	[list of files]
sh4 (unofficial port)	112.5 kB	409.0 kB	[list of files]
sparc64 (unofficial port)	80.7 kB	2,085.0 kB	[list of files]
x32 (unofficial port)	101.1 kB	321.0 kB	[list of files]