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[ Source: primer3  ]

Package: primer3 (2.3.7-4 and others)

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tool to design flanking oligo nucleotides for DNA amplification

Primer3 picks primers for Polymerase Chain Reactions (PCRs), considering as criteria oligonucleotide melting temperature, size, GC content and primer-dimer possibilities, PCR product size, positional constraints within the source sequence, and miscellaneous other constraints. All of these criteria are user-specifiable as constraints, and some are specifiable as terms in an objective function that characterizes an optimal primer pair.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: scope::utility, works-with-format::plaintext, Works with: Need an extra tag

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Download primer3

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 2.3.7-4 171.8 kB722.0 kB [list of files]
amd64 2.3.7-4 168.1 kB655.0 kB [list of files]
arm64 2.3.7-4 154.9 kB611.0 kB [list of files]
armel 2.3.7-4 159.1 kB670.0 kB [list of files]
armhf 2.3.7-4 152.5 kB622.0 kB [list of files]
hppa (unofficial port) 2.3.7-4 166.6 kB648.0 kB [list of files]
hurd-i386 2.3.7-4 169.7 kB678.0 kB [list of files]
i386 2.3.7-4 169.6 kB682.0 kB [list of files]
kfreebsd-amd64 2.3.7-4 168.2 kB655.0 kB [list of files]
kfreebsd-i386 2.3.7-4 169.5 kB682.0 kB [list of files]
m68k (unofficial port) 2.3.7-4 155.1 kB646.0 kB [list of files]
mips 2.3.7-4 163.7 kB685.0 kB [list of files]
mips64el 2.3.7-4+b1 165.4 kB694.0 kB [list of files]
mipsel 2.3.7-4 166.0 kB685.0 kB [list of files]
powerpc 2.3.7-4 158.7 kB822.0 kB [list of files]
powerpcspe (unofficial port) 2.3.7-4 168.4 kB886.0 kB [list of files]
ppc64 (unofficial port) 2.3.7-4 165.2 kB826.0 kB [list of files]
ppc64el 2.3.7-4 167.5 kB826.0 kB [list of files]
s390x 2.3.7-4 154.7 kB647.0 kB [list of files]
sh4 (unofficial port) 2.3.7-4 196.1 kB682.0 kB [list of files]
sparc64 (unofficial port) 2.3.7-4 155.8 kB669.0 kB [list of files]
x32 (unofficial port) 2.3.7-3 168.1 kB662.0 kB [list of files]