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[ Source: poa  ]

Package: poa (2.0+20060928-7)

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Partial Order Alignment for multiple sequence alignment

POA is Partial Order Alignment, a fast program for multiple sequence alignment (MSA) in bioinformatics. Its advantages are speed, scalability, sensitivity, and the superior ability to handle branching / indels in the alignment. Partial order alignment is an approach to MSA, which can be combined with existing methods such as progressive alignment. POA optimally aligns a pair of MSAs and which therefore can be applied directly to progressive alignment methods such as CLUSTAL. For large alignments, Progressive POA is 10-30 times faster than CLUSTALW.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: scope::utility, works-with-format::plaintext, Works with: Need an extra tag

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Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 52.0 kB152.0 kB [list of files]
amd64 51.7 kB140.0 kB [list of files]
arm64 48.7 kB131.0 kB [list of files]
armel 48.9 kB135.0 kB [list of files]
armhf 46.8 kB107.0 kB [list of files]
hppa (unofficial port) 48.8 kB132.0 kB [list of files]
hurd-i386 52.3 kB143.0 kB [list of files]
i386 52.4 kB147.0 kB [list of files]
kfreebsd-amd64 51.7 kB136.0 kB [list of files]
kfreebsd-i386 52.7 kB143.0 kB [list of files]
m68k (unofficial port) 45.0 kB127.0 kB [list of files]
mips 48.5 kB143.0 kB [list of files]
mips64el 49.4 kB152.0 kB [list of files]
mipsel 48.9 kB143.0 kB [list of files]
powerpcspe (unofficial port) 47.6 kB183.0 kB [list of files]
ppc64 (unofficial port) 54.6 kB184.0 kB [list of files]
ppc64el 56.5 kB184.0 kB [list of files]
riscv64 (unofficial port) 48.3 kB112.0 kB [list of files]
s390x 49.5 kB139.0 kB [list of files]
sh4 (unofficial port) 54.7 kB123.0 kB [list of files]
sparc64 (unofficial port) 46.0 kB137.0 kB [list of files]
x32 (unofficial port) 51.1 kB131.0 kB [list of files]