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[ Source: plink  ]

Package: plink (1.07+dfsg-1)

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whole-genome association analysis toolset

plink expects as input the data from SNP (single nucleotide polymorphism) chips of many individuals and their phenotypical description of a disease. It finds associations of single or pairs of DNA variations with a phenotype and can retrieve SNP annotation from an online source.

SNPs can evaluated individually or as pairs for their association with the disease phenotypes. The joint investigation of copy number variations is supported. A variety of statistical tests have been implemented.

Please note: The executable was renamed to plink1 because of a name clash. Please read more about this in /usr/share/doc/README.Debian.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Purpose: Analysing

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Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 1,102.5 kB3,902.0 kB [list of files]
amd64 1,079.2 kB3,101.0 kB [list of files]
arm64 967.0 kB2,797.0 kB [list of files]
armel 954.8 kB2,876.0 kB [list of files]
armhf 975.5 kB2,028.0 kB [list of files]
hppa (unofficial port) 1,021.4 kB2,961.0 kB [list of files]
hurd-i386 1,137.3 kB3,452.0 kB [list of files]
i386 1,137.7 kB3,448.0 kB [list of files]
kfreebsd-amd64 1,078.5 kB3,117.0 kB [list of files]
kfreebsd-i386 1,137.6 kB3,444.0 kB [list of files]
m68k (unofficial port) 963.3 kB2,932.0 kB [list of files]
mips 952.1 kB3,747.0 kB [list of files]
mips64el 954.8 kB3,659.0 kB [list of files]
mipsel 972.1 kB3,758.0 kB [list of files]
powerpc 1,011.9 kB3,252.0 kB [list of files]
powerpcspe (unofficial port) 1,008.1 kB3,316.0 kB [list of files]
ppc64 (unofficial port) 1,028.7 kB3,509.0 kB [list of files]
ppc64el 1,064.9 kB3,445.0 kB [list of files]
s390x 1,012.9 kB3,472.0 kB [list of files]
sh4 (unofficial port) 1,433.7 kB3,008.0 kB [list of files]
sparc64 (unofficial port) 924.1 kB3,050.0 kB [list of files]
x32 (unofficial port) 1,085.4 kB3,044.0 kB [list of files]