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[ Source: htslib  ]

Package: libhts-dev (1.7-2)

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development files for the HTSlib

HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.

HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.

This package contains development files for the HTSlib: headers, static library, manual pages, etc.

Tags: Software Development: Libraries, Role: Development Library

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Download libhts-dev

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 458.1 kB2,099.0 kB [list of files]
amd64 381.4 kB1,394.0 kB [list of files]
arm64 343.1 kB1,274.0 kB [list of files]
armel 337.6 kB1,123.0 kB [list of files]
armhf 341.6 kB939.0 kB [list of files]
hppa (unofficial port) 384.2 kB1,268.0 kB [list of files]
hurd-i386 407.1 kB1,315.0 kB [list of files]
i386 405.5 kB1,318.0 kB [list of files]
kfreebsd-amd64 381.6 kB1,392.0 kB [list of files]
kfreebsd-i386 405.6 kB1,317.0 kB [list of files]
m68k (unofficial port) 332.4 kB1,142.0 kB [list of files]
mips 396.4 kB1,384.0 kB [list of files]
mips64el 404.4 kB1,772.0 kB [list of files]
mipsel 401.4 kB1,382.0 kB [list of files]
powerpcspe (unofficial port) 352.1 kB1,202.0 kB [list of files]
ppc64 (unofficial port) 374.4 kB1,560.0 kB [list of files]
ppc64el 392.6 kB1,583.0 kB [list of files]
s390x 366.8 kB1,482.0 kB [list of files]
sh4 (unofficial port) 412.6 kB1,059.0 kB [list of files]
sparc64 (unofficial port) 352.8 kB1,450.0 kB [list of files]
x32 (unofficial port) 375.1 kB1,213.0 kB [list of files]