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[ Source: canu  ]

Package: canu (1.7.1+dfsg-1 and others)

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single molecule sequence assembler for genomes

Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION).

Canu is a hierarchical assembly pipeline which runs in four steps:

 * Detect overlaps in high-noise sequences using MHAP
 * Generate corrected sequence consensus
 * Trim corrected sequences
 * Assemble trimmed corrected sequences

Other Packages Related to canu

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Download canu

Download for all available architectures
Architecture Version Package Size Installed Size Files
amd64 1.7.1+dfsg-1 2,042.7 kB14,602.0 kB [list of files]
m68k (unofficial port) 1.6+dfsg-1 1,701.9 kB11,292.0 kB [list of files]
powerpcspe (unofficial port) 1.6+dfsg-1 1,934.5 kB13,927.0 kB [list of files]
ppc64 (unofficial port) 1.6+dfsg-1 1,985.7 kB15,043.0 kB [list of files]
sh4 (unofficial port) 1.6+dfsg-1 1,989.5 kB10,115.0 kB [list of files]
sparc64 (unofficial port) 1.6+dfsg-1 1,665.0 kB11,879.0 kB [list of files]