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Package: bitseq (0.7.5+dfsg-3)

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Bayesian Inference of Transcripts from Sequencing Data

BitSeq is an application for inferring expression levels of individual transcripts from sequencing (RNA-Seq) data and estimating differential expression (DE) between conditions. An advantage of this approach is the ability to account for both technical uncertainty and intrinsic biological variance in order to avoid false DE calls. The technical contribution to the uncertainty comes both from finite read-depth and the possibly ambiguous mapping of reads to multiple transcripts.

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Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 346.5 kB2,149.0 kB [list of files]
amd64 323.9 kB1,791.0 kB [list of files]
arm64 293.2 kB1,663.0 kB [list of files]
armel 273.4 kB1,502.0 kB [list of files]
armhf 276.9 kB1,074.0 kB [list of files]
hppa (unofficial port) 306.8 kB1,652.0 kB [list of files]
hurd-i386 347.3 kB1,882.0 kB [list of files]
i386 346.2 kB1,862.0 kB [list of files]
kfreebsd-amd64 321.7 kB1,787.0 kB [list of files]
kfreebsd-i386 346.0 kB1,858.0 kB [list of files]
m68k (unofficial port) 295.4 kB1,570.0 kB [list of files]
mips 314.4 kB2,016.0 kB [list of files]
mips64el 323.4 kB2,161.0 kB [list of files]
mipsel 323.4 kB2,020.0 kB [list of files]
powerpcspe (unofficial port) 319.3 kB2,202.0 kB [list of files]
ppc64 (unofficial port) 325.8 kB2,663.0 kB [list of files]
ppc64el 322.1 kB2,407.0 kB [list of files]
s390x 301.6 kB2,159.0 kB [list of files]
sh4 (unofficial port) 364.8 kB1,595.0 kB [list of files]
sparc64 (unofficial port) 285.9 kB1,737.0 kB [list of files]
x32 (unofficial port) 326.7 kB1,674.0 kB [list of files]