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Package: bitseq (0.7.5+dfsg-4)

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Bayesian Inference of Transcripts from Sequencing Data

BitSeq is an application for inferring expression levels of individual transcripts from sequencing (RNA-Seq) data and estimating differential expression (DE) between conditions. An advantage of this approach is the ability to account for both technical uncertainty and intrinsic biological variance in order to avoid false DE calls. The technical contribution to the uncertainty comes both from finite read-depth and the possibly ambiguous mapping of reads to multiple transcripts.

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Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 362.3 kB2,165.0 kB [list of files]
amd64 340.3 kB1,879.0 kB [list of files]
arm64 299.8 kB1,655.0 kB [list of files]
armel 278.8 kB1,514.0 kB [list of files]
armhf 285.3 kB1,090.0 kB [list of files]
hppa (unofficial port) 318.0 kB1,701.0 kB [list of files]
hurd-i386 359.3 kB1,882.0 kB [list of files]
i386 359.3 kB1,910.0 kB [list of files]
kfreebsd-amd64 338.3 kB1,815.0 kB [list of files]
kfreebsd-i386 359.3 kB1,878.0 kB [list of files]
m68k (unofficial port) 316.1 kB1,674.0 kB [list of files]
mips 322.9 kB2,056.0 kB [list of files]
mips64el 329.7 kB2,183.0 kB [list of files]
mipsel 331.5 kB2,056.0 kB [list of files]
powerpcspe (unofficial port) 319.7 kB2,202.0 kB [list of files]
ppc64 (unofficial port) 340.7 kB2,663.0 kB [list of files]
ppc64el 341.8 kB2,407.0 kB [list of files]
s390x 295.8 kB1,875.0 kB [list of files]
sh4 (unofficial port) 375.3 kB1,623.0 kB [list of files]
sparc64 (unofficial port) 295.2 kB1,777.0 kB [list of files]
x32 (unofficial port) 335.0 kB1,694.0 kB [list of files]