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[ Source: aragorn  ]

Package: aragorn (1.2.38-2)

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tRNA and tmRNA detection in nucleotide sequences

The program employs heuristic algorithms to predict tRNA secondary structure, based on homology with recognized tRNA consensus sequences and ability to form a base-paired cloverleaf. tmRNA genes are identified using a modified version of the BRUCE program.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, use::searching, Supports Format: works-with-format::plaintext, works-with::biological-sequence

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Download aragorn

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 91.3 kB405.0 kB [list of files]
amd64 83.3 kB377.0 kB [list of files]
arm64 79.0 kB365.0 kB [list of files]
armel 85.4 kB392.0 kB [list of files]
armhf 82.0 kB344.0 kB [list of files]
hppa (unofficial port) 88.5 kB380.0 kB [list of files]
hurd-i386 81.5 kB380.0 kB [list of files]
i386 81.7 kB384.0 kB [list of files]
kfreebsd-amd64 83.4 kB373.0 kB [list of files]
kfreebsd-i386 81.6 kB376.0 kB [list of files]
m68k (unofficial port) 77.9 kB372.0 kB [list of files]
mips 88.6 kB401.0 kB [list of files]
mips64el 89.9 kB406.0 kB [list of files]
mipsel 89.4 kB401.0 kB [list of files]
powerpcspe (unofficial port) 82.5 kB420.0 kB [list of files]
ppc64 (unofficial port) 82.2 kB421.0 kB [list of files]
ppc64el 81.8 kB421.0 kB [list of files]
riscv64 (unofficial port) 88.8 kB353.0 kB [list of files]
s390x 85.5 kB401.0 kB [list of files]
sh4 (unofficial port) 97.3 kB364.0 kB [list of files]
sparc64 (unofficial port) 86.9 kB405.0 kB [list of files]
x32 (unofficial port) 82.4 kB368.0 kB [list of files]