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[ Source: aragorn  ]

Package: aragorn (1.2.38-4 and others)

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tRNA and tmRNA detection in nucleotide sequences

The program employs heuristic algorithms to predict tRNA secondary structure, based on homology with recognized tRNA consensus sequences and ability to form a base-paired cloverleaf. tmRNA genes are identified using a modified version of the BRUCE program.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, use::searching, Supports Format: works-with-format::plaintext, works-with::biological-sequence

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Download aragorn

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 1.2.38-4 92.6 kB407.0 kB [list of files]
amd64 1.2.38-4 84.6 kB379.0 kB [list of files]
arm64 1.2.38-4 82.4 kB375.0 kB [list of files]
armel 1.2.38-4 85.8 kB398.0 kB [list of files]
armhf 1.2.38-4 82.5 kB350.0 kB [list of files]
hppa (unofficial port) 1.2.38-4 90.1 kB386.0 kB [list of files]
i386 1.2.38-4 83.3 kB390.0 kB [list of files]
ia64 (unofficial port) 1.2.38-4 115.9 kB536.0 kB [list of files]
m68k (unofficial port) 1.2.38-4 79.4 kB374.0 kB [list of files]
mips64el 1.2.38-4 90.0 kB408.0 kB [list of files]
mipsel 1.2.38-4 90.1 kB403.0 kB [list of files]
ppc64 (unofficial port) 1.2.38-4 85.8 kB423.0 kB [list of files]
ppc64el 1.2.38-4 85.6 kB423.0 kB [list of files]
riscv64 (unofficial port) 1.2.38-4+b1 91.1 kB359.0 kB [list of files]
s390x 1.2.38-4 86.9 kB403.0 kB [list of files]
sh4 (unofficial port) 1.2.38-4 98.5 kB370.0 kB [list of files]
sparc64 (unofficial port) 1.2.38-4 87.8 kB407.0 kB [list of files]
x32 (unofficial port) 1.2.38-4 83.3 kB374.0 kB [list of files]