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[ Source: aragorn  ]

Package: aragorn (1.2.38-1)

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tRNA and tmRNA detection in nucleotide sequences

The program employs heuristic algorithms to predict tRNA secondary structure, based on homology with recognized tRNA consensus sequences and ability to form a base-paired cloverleaf. tmRNA genes are identified using a modified version of the BRUCE program.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, use::searching, Supports Format: works-with-format::plaintext, works-with::biological-sequence

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Download aragorn

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 92.3 kB405.0 kB [list of files]
amd64 84.0 kB373.0 kB [list of files]
arm64 79.9 kB365.0 kB [list of files]
armel 86.1 kB400.0 kB [list of files]
armhf 83.1 kB348.0 kB [list of files]
hppa (unofficial port) 89.0 kB380.0 kB [list of files]
hurd-i386 81.5 kB380.0 kB [list of files]
i386 81.4 kB376.0 kB [list of files]
kfreebsd-amd64 84.0 kB377.0 kB [list of files]
kfreebsd-i386 81.5 kB376.0 kB [list of files]
m68k (unofficial port) 77.5 kB372.0 kB [list of files]
mips 90.3 kB401.0 kB [list of files]
mips64el 91.1 kB406.0 kB [list of files]
mipsel 91.0 kB401.0 kB [list of files]
powerpc 80.8 kB420.0 kB [list of files]
powerpcspe (unofficial port) 84.0 kB420.0 kB [list of files]
ppc64 (unofficial port) 83.5 kB421.0 kB [list of files]
ppc64el 83.1 kB421.0 kB [list of files]
s390x 86.5 kB409.0 kB [list of files]
sh4 (unofficial port) 97.0 kB364.0 kB [list of files]
sparc64 (unofficial port) 90.0 kB413.0 kB [list of files]
x32 (unofficial port) 83.4 kB372.0 kB [list of files]