Package: altree (1.3.2-2 and others)

[ Source: altree  ]

program to perform phylogeny-based association and localization analysis

ALTree was designed to perform association detection and localization of susceptibility sites using haplotype phylogenetic trees: first, it allows the detection of an association between a candidate gene and a disease, and second, it enables to make hypothesis about the susceptibility loci.

Tags: Software Development: Perl Development, Libraries, Field: field::biology, field::biology:bioinformatics, Implemented in: C, implemented-in::perl, interface::commandline, Role: Development Library, role::program, role::shared-lib, Scope: Utility, Purpose: Analysing, use::comparing, works-with-format::TODO, Supports Format: Plain Text, Works with: Need an extra tag

Other Packages Related to altree

• dep: libblas3

  Basic Linear Algebra Reference implementations, shared library

  or libblas.so.3

  virtual package provided by libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libc6 (>= 2.34) [not alpha, ia64, sh4]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• dep: libgsl27 (>= 2.7.1)

  GNU Scientific Library (GSL) -- library package

• dep: libmath-tamuanova-perl

  Perl extension for the tamuanova library

• dep: perl (>= 5.38.2-3.2) [not armhf]

  Larry Wall's Practical Extraction and Report Language

  dep: perl (>= 5.38.2-3.2+b1) [armhf]

• dep: perlapi-5.38.2 [not armel, armhf, hppa, m68k, sh4, x32]

  virtual package provided by perl-base

• dep: perlapi-5.38.2t64 [armel, armhf, hppa, m68k, sh4, x32]

  virtual package provided by perl-base

• rec: libopenblas0

  Optimized BLAS (linear algebra) library (meta)

  or libblis4

  BLAS-like Library Instantiation Software Framework (32bit,meta)

  or libmkl-rt

  Intel® MKL: Single Dynamic Library (SDL)

  or libblas.so.3

  virtual package provided by libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• sug: altree-examples

  example files for ALTree

Download altree

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	1.3.2-2+b2	337.1 kB	570.0 kB	[list of files]
amd64	1.3.2-2+b2	337.1 kB	562.0 kB	[list of files]
arm64	1.3.2-2+b2	337.2 kB	570.0 kB	[list of files]
armel	1.3.2-2+b2	336.3 kB	561.0 kB	[list of files]
armhf	1.3.2-2+b2	333.2 kB	541.0 kB	[list of files]
hppa (unofficial port)	1.3.2-2+b2	338.4 kB	573.0 kB	[list of files]
i386	1.3.2-2+b2	337.1 kB	561.0 kB	[list of files]
ia64 (unofficial port)	1.3.2-2+b2	345.3 kB	621.0 kB	[list of files]
m68k (unofficial port)	1.3.2-2+b2	333.0 kB	553.0 kB	[list of files]
mips64el	1.3.2-2+b2	336.8 kB	573.0 kB	[list of files]
ppc64 (unofficial port)	1.3.2-2+b2	340.1 kB	635.0 kB	[list of files]
ppc64el	1.3.2-2+b2	339.4 kB	634.0 kB	[list of files]
riscv64	1.3.2-2+b3	338.6 kB	554.0 kB	[list of files]
s390x	1.3.2-2+b2	337.4 kB	566.0 kB	[list of files]
sh4 (unofficial port)	1.3.2-2+b2	338.3 kB	569.0 kB	[list of files]
sparc64 (unofficial port)	1.3.2-2+b2	334.2 kB	1,532.0 kB	[list of files]
x32 (unofficial port)	1.3.2-2+b2	336.5 kB	557.0 kB	[list of files]