Пакет: smrtanalysis (0~20210112)

[ Источник: smrtanalysis  ]

software suite for single molecule, real-time sequencing

SMRT® Analysis is a powerful, open-source bioinformatics software suite available for analysis of DNA sequencing data from Pacific Biosciences’ SMRT technology. Users can choose from a variety of analysis protocols that utilize PacBio® and third-party tools. Analysis protocols include de novo genome assembly, cDNA mapping, DNA base-modification detection, and long-amplicon analysis to determine phased consensus sequences.

This is a metapackage that depends on the components of SMRT Analysis.

Другие пакеты, относящиеся к smrtanalysis

• dep: blasr

  mapping single-molecule sequencing reads

• dep: pbbamtools

  processing Pacific Biosciences binary alignment/map files

• dep: pbdagcon

  sequence consensus using directed acyclic graphs

• sug: falcon

  Пакет недоступен

• sug: kineticstools

  detection of DNA modifications

• sug: pbalign

  Пакет недоступен

• sug: pbbarcode

  Пакет недоступен

• sug: pbgenomicconsensus

  Пакет недоступен

• sug: pbh5tools

  Пакет недоступен

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