Пакет: r-bioc-mofa (1.6.1+dfsg-10)

[ Источник: r-bioc-mofa  ]

Multi-Omics Factor Analysis (MOFA)

Multi-Omics Factor Analysis: an unsupervised framework for the integration of multi-omics data sets.

Upstream no longer supports this package. This package only still ships to help with rerunning/comparing/transitioning existing projects. For new projects please upgrade to MOFA2 (MOFA+). Actually, also when adding new data to old projects, MOFA2 has further improved the handling of multiple factors, and to compensate for a batch effect that is likely introduced with additional data, may be an immediate use case for that new version.

Другие пакеты, относящиеся к r-bioc-mofa

• dep: python3-mofapy

  Multi-Omics Factor Analysis (MOFA) - Python module

• dep: r-api-4.0

  виртуальный пакет, предоставляемый r-base-core

• dep: r-api-bioc-3.16

  виртуальный пакет, предоставляемый r-bioc-biocgenerics

• dep: r-base-core (>= 4.2.2.20221110-2)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-multiassayexperiment

  Software for integrating multi-omics experiments in BioConductor

• dep: r-bioc-rhdf5

  BioConductor HDF5 interface to R

• dep: r-cran-corrplot

  Visualization of a Correlation Matrix

• dep: r-cran-cowplot

  GNU R streamlined plot theme and plot annotations for 'ggplot2'

• dep: r-cran-doparallel

  GNU R foreach parallel adaptor for the parallel package

• dep: r-cran-dplyr

  GNU R grammar of data manipulation

• dep: r-cran-foreach

  GNU R foreach looping support

• dep: r-cran-ggally

  GNU R extension to r-cran-ggplot2

• dep: r-cran-ggbeeswarm

  GNU R categorical scatter (violin point) plots

• dep: r-cran-ggplot2

  implementation of the Grammar of Graphics

• dep: r-cran-ggrepel

  auto-position non-overlapping text labels in plots

• dep: r-cran-pheatmap

  GNU R package to create pretty heatmaps

• dep: r-cran-rcolorbrewer

  GNU R package providing suitable color palettes

• dep: r-cran-reshape2

  Flexibly reshape data: a reboot of the reshape package

• dep: r-cran-reticulate

  R interface to Python modules, classes, and functions

• dep: r-cran-scales

  Scale functions for visualization

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

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