Package: kissplice (2.6.2-3)
Links for kissplice
Debian Resources:
Download Source Package kissplice:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Andreas Tille (QA Page)
- Francois Gindraud (QA Page)
External Resources:
- Homepage [kissplice.prabi.fr]
Similar packages:
Detection of various kinds of polymorphisms in RNA-seq data
KisSplice is a piece of software that enables the analysis of RNA-seq data with or without a reference genome. It is an exact local transcriptome assembler that allows one to identify SNPs, indels and alternative splicing events. It can deal with an arbitrary number of biological conditions, and will quantify each variant in each condition. It has been tested on Illumina datasets of up to 1G reads. Its memory consumption is around 5Gb for 100M reads.
Other Packages Related to kissplice
|
|
|
|
-
- dep: bcalm
- de Bruijn compaction in low memory
-
- dep: libc6 (>= 2.34)
- GNU Biblioteca C: Bibliotecas compartilhadas
also a virtual package provided by libc6-udeb
-
- dep: libgcc-s1 (>= 4.3)
- Biblioteca de suporte GCC
-
- dep: libgomp1 (>= 4.9)
- biblioteca de suporte ao GCC OpenMP (GOMP)
-
- dep: libstdc++6 (>= 13.1)
- Biblioteca C++ padrão da GNU v3
-
- dep: python3
- linguagem orientada a objetos de alto nível e interativa (versão python3 padrão)
-
- dep: zlib1g (>= 1:1.1.4)
- biblioteca de compressão - runtime (tempo de execução)
Download kissplice
Architecture | Package Size | Installed Size | Files |
---|---|---|---|
riscv64 | 484.2 kB | 1,059.0 kB | [list of files] |