Package: ruby-fix-trinity-output (1.0.0-2)

[ Source: ruby-fix-trinity-output  ]

Fix output fastq files from trinityrnaseq

trinityrnaseq outputs fastq files that have been 'corrected'

Unfortunately these files are no longer properly paired and therefore can't be used in most aligners such as bowtie2 and snap-aligner. This script attempts to fix that and produce 2 properly paired fastq files and a fastq file containing single reads

Other Packages Related to ruby-fix-trinity-output

• dep: ruby

  Interpreter of object-oriented scripting language Ruby (default version)

  or ruby-interpreter

  Package not available

• dep: ruby-trollop (>= 2.0)

  command-line argument processing library

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