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[ Source: spoa  ]

Package: libspoa7.0.0 (4.1.4-1)

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SIMD partial order alignment library

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

This package contains the shared library.

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Download libspoa7.0.0

Download for all available architectures
Architecture Package Size Installed Size Files
alpha (unofficial port) 64.5 kB209.0 kB [list of files]
amd64 68.7 kB298.0 kB [list of files]
arm64 48.9 kB144.0 kB [list of files]
armel 54.5 kB156.0 kB [list of files]
armhf 58.5 kB124.0 kB [list of files]
hppa (unofficial port) 74.2 kB190.0 kB [list of files]
i386 87.6 kB484.0 kB [list of files]
ia64 (unofficial port) 76.8 kB290.0 kB [list of files]
m68k (unofficial port) 58.9 kB168.0 kB [list of files]
mips64el 62.5 kB213.0 kB [list of files]
ppc64 (unofficial port) 69.0 kB209.0 kB [list of files]
ppc64el 60.7 kB208.0 kB [list of files]
riscv64 69.3 kB140.0 kB [list of files]
s390x 72.8 kB201.0 kB [list of files]
sh4 (unofficial port) 76.5 kB208.0 kB [list of files]
sparc64 (unofficial port) 61.0 kB1,044.0 kB [list of files]
x32 (unofficial port) 56.7 kB148.0 kB [list of files]