Pacote: libfastahack0 (1.0.0+dfsg-11 e outros)

[ Fonte: libfastahack  ]

library for indexing and sequence extraction from FASTA files (lib)

fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use.

Features:

 * FASTA index (.fai) generation for FASTA files
 * Sequence extraction
 * Subsequence extraction
 * Sequence statistics (currently only entropy is provided)

Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence.

This package contains the dynamic library.

Etiquetas: Função: Biblioteca compartilhada

Outros pacotes relacionados a libfastahack0

• dep: libc6 (>= 2.38)

  GNU Biblioteca C: Bibliotecas compartilhadas
  também um pacote virtual fornecido por libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  Biblioteca de suporte GCC

• dep: libstdc++6 (>= 13.1)

  Biblioteca C++ padrão da GNU v3

Download de libfastahack0

Baixe para todas as arquiteturas disponíveis

Arquitetura	Versão	Tamanho do pacote	Tamanho instalado	Arquivos
amd64	1.0.0+dfsg-11+b3	25.8 kB	80.0 kB	[lista de arquivos]