Pacote: libjellyfish-2.0-2 (2.3.0-15 e outros)

[ Fonte: jellyfish  ]

count k-mers in DNA sequences (dynamic library of jellyfish)

JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence. JELLYFISH can count k-mers using an order of magnitude less memory and an order of magnitude faster than other k-mer counting packages by using an efficient encoding of a hash table and by exploiting the "compare-and-swap" CPU instruction to increase parallelism.

JELLYFISH is a command-line program that reads FASTA and multi-FASTA files containing DNA sequences. It outputs its k-mer counts in an binary format, which can be translated into a human-readable text format using the "jellyfish dump" command.

This package contains the dynamic library the main executable of jellyfish is linked to.

Etiquetas: Função: Biblioteca compartilhada

Outros pacotes relacionados a libjellyfish-2.0-2

• dep: libc6 (>= 2.34)

  GNU Biblioteca C: Bibliotecas compartilhadas
  também um pacote virtual fornecido por libc6-udeb

• dep: libgcc-s1 (>= 3.0) [não armel, armhf]

  Biblioteca de suporte GCC

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 11)

  Biblioteca C++ padrão da GNU v3

Download de libjellyfish-2.0-2

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Arquitetura	Versão	Tamanho do pacote	Tamanho instalado	Arquivos
amd64	2.3.0-15+b3	61.7 kB	192.0 kB	[lista de arquivos]
arm64	2.3.0-15+b3	57.4 kB	219.0 kB	[lista de arquivos]
armel	2.3.0-15+b3	53.1 kB	163.0 kB	[lista de arquivos]
armhf	2.3.0-15+b3	54.0 kB	135.0 kB	[lista de arquivos]
i386	2.3.0-15+b3	68.8 kB	195.0 kB	[lista de arquivos]
mips64el	2.3.0-15+b3	58.4 kB	232.0 kB	[lista de arquivos]
ppc64el	2.3.0-15+b3	67.4 kB	284.0 kB	[lista de arquivos]