Pakiet: r-bioc-dropletutils (1.18.1+ds-1)

[ Pakiet źródłowy: r-bioc-dropletutils  ]

BioConductor utilities for handling single-cell droplet data

Provides a number of utility functions for handling single-cell (RNA-seq) data from droplet technologies such as 10X Genomics. This includes data loading from count matrices or molecule information files, identification of cells from empty droplets, removal of barcode-swapped pseudo-cells, and downsampling of the count matrix.

Inne pakiety związane z r-bioc-dropletutils

• dep: libc6 (>= 2.29)

  Biblioteka GNU C: biblioteki współdzielone
  również pakiet wirtualny udostępniany przez libc6-udeb

• dep: libgcc-s1 (>= 3.0) [nie armel, armhf, mipsel]

  Biblioteka wspomagająca GCC

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [mipsel]

• dep: libhdf5-103-1

  HDF5 C runtime files - serial version

• dep: libhdf5-cpp-103-1 (>= 1.10.5)

  HDF5 - C++ runtime files - serial version

• dep: libstdc++6 (>= 11)

  Standardowa biblioteka GNU C++, wersja 3

• dep: r-api-4.0

  pakiet wirtualny udostępniany przez r-base-core

• dep: r-api-bioc-3.16

  pakiet wirtualny udostępniany przez r-bioc-biocgenerics

• dep: r-base-core (>= 4.2.2.20221110-1)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-beachmat

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• dep: r-bioc-biocgenerics

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• dep: r-bioc-biocparallel

  BioConductor facilities for parallel evaluation

• dep: r-bioc-delayedarray

  BioConductor delayed operations on array-like objects

• dep: r-bioc-delayedmatrixstats

  Functions on Rows and Columns of 'DelayedMatrix' Objects

• dep: r-bioc-edger

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• dep: r-bioc-genomicranges

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-hdf5array

  HDF5 backend for DelayedArray objects

• dep: r-bioc-iranges

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-rhdf5

  BioConductor HDF5 interface to R

• dep: r-bioc-rhdf5lib

  GNU R hdf5 library

• dep: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-scuttle

  BioConductor single-cell RNA-Seq analysis utilities

• dep: r-bioc-singlecellexperiment

  S4 Classes for Single Cell Data

• dep: r-bioc-summarizedexperiment

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• dep: r-cran-bh

  (Virtual) GNU R package to provide BH

• dep: r-cran-dqrng

  GNU R fast pseudo random number generators

• dep: r-cran-matrix

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• dep: r-cran-r.utils

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• dep: r-cran-rcpp

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• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-cran-jsonlite

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• sug: r-cran-knitr

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• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-testthat

  GNU R testsuite

Pobieranie r-bioc-dropletutils

Pobierz dla wszystkich dostępnych architektur

Architektura	Rozmiar pakietu	Rozmiar po instalacji	Pliki
amd64	381,6 KiB	718,0 KiB	[lista plików]
arm64	364,5 KiB	758,0 KiB	[lista plików]
armel	362,9 KiB	693,0 KiB	[lista plików]
armhf	365,0 KiB	628,0 KiB	[lista plików]
i386	384,2 KiB	736,0 KiB	[lista plików]
mips64el	362,4 KiB	847,0 KiB	[lista plików]
mipsel	360,7 KiB	769,0 KiB	[lista plików]
ppc64el	381,3 KiB	822,0 KiB	[lista plików]
s390x	371,7 KiB	742,0 KiB	[lista plików]