[ Source: nanolyse ]
Package: nanolyse (1.2.0-1)
Links for nanolyse
Debian Resources:
Download Source Package nanolyse:
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
remove lambda phage reads from a fastq file
NanoLyse is a tool for rapid removal of contaminant DNA, using the Minimap2 aligner through the mappy Python binding. A typical application would be the removal of the lambda phage control DNA fragment supplied by ONT, for which the reference sequence is included in the package. However, this approach may lead to unwanted loss of reads from regions highly homologous to the lambda phage genome.
Other Packages Related to nanolyse
|
|
|
|
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: python3-biopython
- Python3 library for bioinformatics
-
- dep: python3-mappy
- Python3 interface minimap2
Download nanolyse
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 24.5 kB | 66.0 kB | [list of files] |
| arm64 | 24.5 kB | 66.0 kB | [list of files] |
| armel | 24.5 kB | 66.0 kB | [list of files] |
| armhf | 24.5 kB | 66.0 kB | [list of files] |
| i386 | 24.5 kB | 66.0 kB | [list of files] |
| mips64el | 24.5 kB | 66.0 kB | [list of files] |
| mipsel | 24.5 kB | 66.0 kB | [list of files] |
| ppc64el | 24.5 kB | 66.0 kB | [list of files] |
| s390x | 24.5 kB | 66.0 kB | [list of files] |