Package: altree (1.3.1-10 and others)

[ Source: altree  ]

program to perform phylogeny-based association and localization analysis

ALTree was designed to perform association detection and localization of susceptibility sites using haplotype phylogenetic trees: first, it allows the detection of an association between a candidate gene and a disease, and second, it enables to make hypothesis about the susceptibility loci.

Tags: Software Development: Perl Development, Libraries, Field: field::biology, field::biology:bioinformatics, Implemented in: C, implemented-in::perl, interface::commandline, Role: Development Library, role::program, role::shared-lib, Scope: Utility, Purpose: Analysing, use::comparing, works-with-format::TODO, Supports Format: Plain Text, Works with: Need an extra tag

Other Packages Related to altree

• dep: libblas3

  Basic Linear Algebra Reference implementations, shared library

  or libblas.so.3

  virtual package provided by libatlas3-base, libblas3, libblis3-openmp, libblis3-pthread, libblis3-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libc6 (>= 2.29)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgsl25 (>= 2.6)

  GNU Scientific Library (GSL) -- library package

• dep: libmath-tamuanova-perl

  Perl extension for the tamuanova library

• dep: perl (>= 5.32.0-4)

  Larry Wall's Practical Extraction and Report Language

• dep: perlapi-5.32.0

  virtual package provided by perl-base

• rec: libopenblas-base

  Optimized BLAS (linear algebra) library (transitional)

  or libatlas3-base

  Automatically Tuned Linear Algebra Software, generic shared

  or libmkl-rt

  Intel® MKL: Single Dynamic Library (SDL)

  or libblas.so.3

  virtual package provided by libatlas3-base, libblas3, libblis3-openmp, libblis3-pthread, libblis3-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• sug: altree-examples

  example files for ALTree

Download altree

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
amd64	1.3.1-10+b1	329.3 kB	552.0 kB	[list of files]
arm64	1.3.1-10+b1	329.7 kB	552.0 kB	[list of files]
armel	1.3.1-10+b1	328.8 kB	551.0 kB	[list of files]
armhf	1.3.1-10+b1	325.8 kB	531.0 kB	[list of files]
i386	1.3.1-10+b1	330.8 kB	559.0 kB	[list of files]
mips64el	1.3.1-10+b1	328.8 kB	559.0 kB	[list of files]
mipsel	1.3.1-10+b1	327.3 kB	554.0 kB	[list of files]
ppc64el	1.3.1-10+b1	332.4 kB	624.0 kB	[list of files]
s390x	1.3.1-10+b1	327.7 kB	556.0 kB	[list of files]