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[ Bron: embassy-domsearch  ]

Pakket: embassy-domsearch (1:0.1.0+20110714-1)

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Extra EMBOSS commands to search for protein domains

The DOMSEARCH programs were developed by Jon Ison and colleagues at MRC HGMP for their protein domain research. They are included as an EMBASSY package as a work in progress.

Applications in this DOMSEARCH release are seqfraggle (removes fragment sequences from DHF files), seqnr (removes redundancy from DHF files), seqsearch (generates PSI-BLAST hits (DHF file) from a DAF file), seqsort (Remove ambiguous classified sequences from DHF files) and seqwords (Generates DHF files from keyword search of UniProt).

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: Analysing

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Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
amd64 127,3 kB628,0 kB [overzicht]
armel 128,3 kB612,0 kB [overzicht]
armhf 125,8 kB604,0 kB [overzicht]
i386 123,5 kB611,0 kB [overzicht]
ia64 131,3 kB655,0 kB [overzicht]
kfreebsd-amd64 126,9 kB561,0 kB [overzicht]
kfreebsd-i386 125,6 kB545,0 kB [overzicht]
mips 122,2 kB613,0 kB [overzicht]
mipsel 123,1 kB613,0 kB [overzicht]
powerpc 124,6 kB612,0 kB [overzicht]
s390 128,7 kB619,0 kB [overzicht]
s390x 129,4 kB632,0 kB [overzicht]
sparc 122,1 kB618,0 kB [overzicht]