alle opties
buster  ] [  sid  ]
[ Bron: voronota  ]

Pakket: voronota (1.18.1877-2)

Verwijzigingen voor voronota


Debian bronnen:

Het bronpakket voronota downloaden:


Externe bronnen:

Vergelijkbare pakketten:

Voronoi diagram-based tool to find atom contacts

The analysis of macromolecular structures often requires a comprehensive definition of atomic neighborhoods. Such a definition can be based on the Voronoi diagram of balls, where each ball represents an atom of some van der Waals radius. Voronota is a software tool for finding all the vertices of the Voronoi diagram of balls. Such vertices correspond to the centers of the empty tangent spheres defined by quadruples of balls. Voronota is especially suitable for processing three-dimensional structures of biological macromolecules such as proteins and RNA.

Since version 1.2 Voronota also uses the Voronoi vertices to construct inter-atom contact surfaces and solvent accessible surfaces. Voronota provides tools to query contacts, generate contacts graphics, compare contacts and evaluate quality of protein structural models using contacts.

Andere aan voronota gerelateerde pakketten

  • depends
  • recommends
  • suggests
  • enhances

voronota downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
alpha (unofficial port) 793,7 kB4.093,0 kB [overzicht]
amd64 808,7 kB3.829,0 kB [overzicht]
arm64 755,5 kB3.597,0 kB [overzicht]
armel 720,8 kB3.540,0 kB [overzicht]
armhf 728,9 kB3.092,0 kB [overzicht]
hppa (unofficial port) 796,5 kB3.716,0 kB [overzicht]
hurd-i386 851,3 kB3.936,0 kB [overzicht]
i386 850,3 kB3.932,0 kB [overzicht]
kfreebsd-amd64 805,4 kB3.825,0 kB [overzicht]
kfreebsd-i386 849,2 kB3.932,0 kB [overzicht]
m68k (unofficial port) 661,9 kB3.523,0 kB [overzicht]
mips 749,9 kB4.073,0 kB [overzicht]
mips64el 742,1 kB4.128,0 kB [overzicht]
mipsel 761,6 kB4.077,0 kB [overzicht]
powerpcspe (unofficial port) 760,5 kB3.716,0 kB [overzicht]
ppc64 (unofficial port) 793,4 kB3.975,0 kB [overzicht]
ppc64el 795,8 kB3.909,0 kB [overzicht]
s390x 738,9 kB3.749,0 kB [overzicht]
sh4 (unofficial port) 888,5 kB3.555,0 kB [overzicht]
sparc64 (unofficial port) 712,4 kB3.649,0 kB [overzicht]
x32 (unofficial port) 804,5 kB3.772,0 kB [overzicht]