Pakket: dialign-tx (1.0.2-15)

[ Bron: dialign-t  ]

Segment-based multiple sequence alignment

DIALIGN-TX is a command line tool to perform multiple alignment of protein or DNA sequences. It is a complete reimplementation of the segment-base approach including several new improvements and heuristics that significantly enhance the quality of the output alignments compared to DIALIGN 2.2 and DIALIGN-T. For pairwise alignment, DIALIGN-TX uses a fragment-chaining algorithm that favours chains of low-scoring local alignments over isolated high-scoring fragments. For multiple alignment, DIALIGN-TX uses an improved greedy procedure that is less sensitive to spurious local sequence similarities.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::TODO, Supports Format: Plain Text, Works with: Need an extra tag

Andere aan dialign-tx gerelateerde pakketten

• dep: dialign-tx-data (= 1.0.2-15)

  Segment-based multiple sequence alignment (data files)

• dep: libc6 (>= 2.34) [niet alpha, ia64, sh4]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• enh: t-coffee

  Multiple Sequence Alignment

dialign-tx downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	104,2 kB	275,0 kB	[overzicht]
amd64	85,5 kB	223,0 kB	[overzicht]
arm64	89,3 kB	210,0 kB	[overzicht]
armel	75,1 kB	198,0 kB	[overzicht]
armhf	66,8 kB	142,0 kB	[overzicht]
hppa (unofficial port)	95,7 kB	211,0 kB	[overzicht]
i386	79,5 kB	210,0 kB	[overzicht]
ia64 (unofficial port)	151,4 kB	447,0 kB	[overzicht]
m68k (unofficial port)	66,0 kB	194,0 kB	[overzicht]
mips64el	99,9 kB	278,0 kB	[overzicht]
ppc64 (unofficial port)	93,3 kB	275,0 kB	[overzicht]
ppc64el	93,0 kB	275,0 kB	[overzicht]
riscv64	106,1 kB	187,0 kB	[overzicht]
s390x	73,6 kB	202,0 kB	[overzicht]
sh4 (unofficial port)	91,8 kB	210,0 kB	[overzicht]
sparc64 (unofficial port)	84,4 kB	1.044,0 kB	[overzicht]
x32 (unofficial port)	82,1 kB	206,0 kB	[overzicht]