Pakket: bwa (0.7.17-7 en anderen)

Verwijzigingen voor bwa

Debian bronnen:

Het bronpakket bwa downloaden:

Beheerders:

Debian Med Packaging Team (QA-pagina, Mailarchief)
Charles Plessy (QA-pagina)
Andreas Tille (QA-pagina)
Carlos Borroto (QA-pagina)
Ognyan Kulev (QA-pagina)
Michael R. Crusoe (QA-pagina)

Externe bronnen:

Homepage [bio-bwa.sourceforge.net]

Vergelijkbare pakketten:

Burrows-Wheeler Aligner

BWA is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome. It consists of three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. The first algorithm is designed for Illumina sequence reads up to 100bp, while the rest two for longer sequences ranged from 70bp to 1Mbp. BWA-MEM and BWA-SW share similar features such as long-read support and split alignment, but BWA-MEM, which is the latest, is generally recommended for high-quality queries as it is faster and more accurate. BWA-MEM also has better performance than BWA-backtrack for 70-100bp Illumina reads.

Tags: Biology: Proteins, Field: Biology, field::biology:bioinformatics, implemented-in::c, User Interface: Command Line, interface::text-mode, role::program, Purpose: Analysing, Comparing

Andere aan bwa gerelateerde pakketten

depends

recommends

suggests

enhances

dep: libc6 (>= 2.34) [niet alpha, ia64, sh4]

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb

dep: libc6 (>= 2.37) [sh4]
dep: libc6.1 (>= 2.34) [alpha]

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6.1-udeb

dep: libc6.1 (>= 2.37) [ia64]
dep: zlib1g (>= 1:1.1.4)

compressiebibliotheek - programma's

rec: perl

Larry Wall's Practical Extraction and Report Language

sug: samtools

processing sequence alignments in SAM, BAM and CRAM formats

bwa downloaden

Pakket downloaden voor alle beschikbare platforms
Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	0.7.17-7+b5	206,9 kB	513,0 kB	[overzicht]
amd64	0.7.17-7+b3	207,3 kB	453,0 kB	[overzicht]
arm64	0.7.17-7+b3	189,1 kB	449,0 kB	[overzicht]
armel	0.7.17-7+b3	190,8 kB	432,0 kB	[overzicht]
armhf	0.7.17-7+b3	190,0 kB	320,0 kB	[overzicht]
hppa (unofficial port)	0.7.17-7+b3	226,4 kB	513,0 kB	[overzicht]
i386	0.7.17-7+b3	230,1 kB	520,0 kB	[overzicht]
ia64 (unofficial port)	0.7.17-7+b4	280,4 kB	925,0 kB	[overzicht]
m68k (unofficial port)	0.7.17-7+b3	204,7 kB	472,0 kB	[overzicht]
mips64el	0.7.17-7+b3	201,0 kB	528,0 kB	[overzicht]
ppc64 (unofficial port)	0.7.17-7+b3	218,1 kB	577,0 kB	[overzicht]
ppc64el	0.7.17-7+b3	228,6 kB	577,0 kB	[overzicht]
riscv64	0.7.17-7+b3	214,5 kB	376,0 kB	[overzicht]
s390x	0.7.17-7+b3	220,3 kB	509,0 kB	[overzicht]
sh4 (unofficial port)	0.7.17-7+b3	273,6 kB	449,0 kB	[overzicht]
sparc64 (unofficial port)	0.7.17-7+b3	182,7 kB	1.093,0 kB	[overzicht]
x32 (unofficial port)	0.7.17-7+b3	218,9 kB	468,0 kB	[overzicht]