Pakket: brig (0.95+dfsg-3 en anderen)

[ Bron: brig  ]

BLAST Ring Image Generator

BRIG can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data.

 * Images show similarity between a central reference sequence and other
   sequences as concentric rings.
 * BRIG will perform all BLAST comparisons and file parsing automatically
   via a simple GUI.
 * Contig boundaries and read coverage can be displayed for draft genomes;
   customized graphs and annotations can be displayed.
 * Using a user-defined set of genes as input, BRIG can display gene
   presence, absence, truncation or sequence variation in a set of
   complete genomes, draft genomes or even raw, unassembled sequence data.
 * BRIG also accepts SAM-formatted read-mapping files enabling genomic
   regions present in unassembled sequence data from multiple samples to
   be compared simultaneously

Andere aan brig gerelateerde pakketten

• dep: cgview

  Circular Genome Viewer

• dep: default-jre [niet riscv64]

  Standard Java or Java compatible Runtime

  of java6-runtime

  virtueel pakket geboden door default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre, openjdk-8-jre

  of java7-runtime

  virtueel pakket geboden door default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre, openjdk-8-jre

  of java8-runtime

  virtueel pakket geboden door default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre, openjdk-8-jre

  of java9-runtime

  virtueel pakket geboden door default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre

  of java10-runtime

  virtueel pakket geboden door default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre

  of java11-runtime

  virtueel pakket geboden door default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre

• dep: default-jre [riscv64]

  Standard Java or Java compatible Runtime

  of java7-runtime

  virtueel pakket geboden door default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre, openjdk-8-jre

  of java8-runtime

  virtueel pakket geboden door default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre, openjdk-8-jre

  of java9-runtime

  virtueel pakket geboden door default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre

  of java10-runtime

  virtueel pakket geboden door default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre

  of java11-runtime

  virtueel pakket geboden door default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre

• dep: jarwrapper (>= 0.5)

  Run executable Java .jar files

• dep: libjdom1-java

  lightweight and fast library using XML

• dep: libswing-layout-java

  Extensions to Swing layout

brig downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	0.95+dfsg-3	112,0 kB	412,0 kB	[overzicht]
amd64	0.95+dfsg-3	112,0 kB	412,0 kB	[overzicht]
arm64	0.95+dfsg-3	112,0 kB	412,0 kB	[overzicht]
armel	0.95+dfsg-3	112,0 kB	412,0 kB	[overzicht]
armhf	0.95+dfsg-3	112,0 kB	412,0 kB	[overzicht]
i386	0.95+dfsg-3	112,0 kB	412,0 kB	[overzicht]
ia64 (unofficial port)	0.95+dfsg-3	112,2 kB	412,0 kB	[overzicht]
m68k (unofficial port)	0.95+dfsg-3	112,0 kB	412,0 kB	[overzicht]
mips64el	0.95+dfsg-3	112,0 kB	412,0 kB	[overzicht]
ppc64 (unofficial port)	0.95+dfsg-3	112,0 kB	412,0 kB	[overzicht]
ppc64el	0.95+dfsg-3	112,0 kB	412,0 kB	[overzicht]
riscv64	0.95+dfsg-3+b2	114,7 kB	414,0 kB	[overzicht]
s390x	0.95+dfsg-3	112,0 kB	412,0 kB	[overzicht]
sh4 (unofficial port)	0.95+dfsg-3	112,0 kB	412,0 kB	[overzicht]
sparc64 (unofficial port)	0.95+dfsg-3	111,7 kB	412,0 kB	[overzicht]
x32 (unofficial port)	0.95+dfsg-3	112,0 kB	412,0 kB	[overzicht]