Pakket: python3-cobra (0.29.0-1 en anderen)

[ Bron: python-cobra  ]

constraint-based modeling of biological networks with Python 3

COnstraint-Based Reconstruction and Analysis (COBRA) methods are widely used for genome-scale modeling of metabolic networks in both prokaryotes and eukaryotes. COBRApy is a constraint-based modeling package that is designed to accommodate the biological complexity of the next generation of COBRA models and provides access to commonly used COBRA methods, such as flux balance analysis, flux variability analysis, and gene deletion analyses.

Andere aan python3-cobra gerelateerde pakketten

• dep: libc6 (>= 2.27) [riscv64, sh4]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.4) [m68k, sparc64]

• dep: libc6.1 (>= 2.26) [ia64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

• dep: libglpk40 (>= 4.59) [ia64, m68k, riscv64, sh4, sparc64]

  linear programming kit with integer (MIP) support

• dep: python-cobra-data (= 0.14.1-1) [alpha, hppa, x32]

  constraint-based modeling of biological networks (data)

  dep: python-cobra-data (= 0.29.0-1) [amd64, arm64, armel, armhf, i386, ppc64, ppc64el]

  dep: python-cobra-data (= 0.5.9-1) [ia64, m68k, riscv64, sh4, sparc64]

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.7) [ia64, riscv64, sparc64]

  dep: python3 (<< 3.8) [m68k, sh4]

  dep: python3 (>= 3.5~) [sparc64]

  dep: python3 (>= 3.6~) [ia64, m68k, riscv64, sh4]

• dep: python3-appdirs (<< 2) [amd64, arm64, armel, armhf, i386, ppc64, ppc64el]

  determining appropriate platform-specific directories (Python 3)

  dep: python3-appdirs (>= 1.4) [amd64, arm64, armel, armhf, i386, ppc64, ppc64el]

• dep: python3-depinfo [niet ia64, m68k, riscv64, sh4, sparc64]

  retrieve and print Python 3 package dependencies

• dep: python3-diskcache [amd64, arm64, armel, armhf, i386, ppc64, ppc64el]

  Python3 module for disk and file backed persistent cache

• dep: python3-future [alpha, hppa, x32]

  Clean single-source support for Python 3 and 2 - Python 3.x

• dep: python3-httpx [amd64, arm64, armel, armhf, i386, ppc64, ppc64el]

  next generation HTTP client

• dep: python3-importlib-resources [amd64, arm64, armel, armhf, i386, ppc64, ppc64el]

  Read resources from Python packages

• dep: python3-numpy [niet ia64, m68k, riscv64, sh4, sparc64]

  Fast array facility to the Python language (Python 3)

• dep: python3-optlang [alpha, hppa, x32]

  sympy based mathematical programming language (Python 3)

  dep: python3-optlang (>= 1.7.0-1~) [amd64, arm64, armel, armhf, i386, ppc64, ppc64el]

• dep: python3-pandas [amd64, arm64, armel, armhf, i386, ppc64, ppc64el]

  data structures for "relational" or "labeled" data

  dep: python3-pandas (>= 0.17.0) [alpha, hppa, x32]

• dep: python3-pydantic [amd64, arm64, armel, armhf, i386, ppc64, ppc64el]

  Data validation and settings management using Python type hinting

• dep: python3-rich [amd64, arm64, armel, armhf, i386, ppc64, ppc64el]

  render rich text, tables, progress bars, syntax highlighting, markdown and more

• dep: python3-ruamel.yaml [niet ia64, m68k, riscv64, sh4, sparc64]

  Roundtrip YAML parser/emitter (Python 3 module)

• dep: python3-sbml5 [amd64, arm64, armel, armhf, i386, ppc64, ppc64el]

  System Biology Markup Language library - Python3 bindings

• dep: python3-simplejson [amd64, arm64, armel, armhf, i386, ppc64, ppc64el]

  simple, fast, extensible JSON encoder/decoder for Python 3.x

• dep: python3-six [niet amd64, arm64, armel, armhf, i386, ppc64, ppc64el]

  Python 2 and 3 compatibility library

• dep: python3-swiglpk [alpha, hppa, x32]

  Plain Python bindings for the GNU Linear Programming Kit (Python 3)

  dep: python3-swiglpk (>= 5.0.8-1~) [amd64, arm64, armel, armhf, i386, ppc64, ppc64el]

• dep: python3-tabulate [niet ia64, m68k, riscv64, sh4, sparc64]

  pretty-print tabular data in Python3

• rec: python3-numpy [niet alpha, hppa, x32]

  Fast array facility to the Python language (Python 3)

• rec: python3-pandas [niet alpha, hppa, x32]

  data structures for "relational" or "labeled" data

• rec: python3-scipy [niet alpha, hppa, x32]

  scientific tools for Python 3

• rec: python3-simplejson [alpha, hppa, x32]

  simple, fast, extensible JSON encoder/decoder for Python 3.x

• sug: python3-matplotlib

  Python based plotting system in a style similar to Matlab (Python 3)

• sug: qsopt-ex

  Exact linear programming solver

python3-cobra downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	0.14.1-1	101,3 kB	536,0 kB	[overzicht]
amd64	0.29.0-1	1.092,6 kB	1.875,0 kB	[overzicht]
arm64	0.29.0-1	1.092,6 kB	1.875,0 kB	[overzicht]
armel	0.29.0-1	1.092,6 kB	1.875,0 kB	[overzicht]
armhf	0.29.0-1	1.092,6 kB	1.875,0 kB	[overzicht]
hppa (unofficial port)	0.14.1-1	101,3 kB	536,0 kB	[overzicht]
i386	0.29.0-1	1.092,6 kB	1.875,0 kB	[overzicht]
ia64 (unofficial port)	0.5.9-1	173,0 kB	989,0 kB	[overzicht]
m68k (unofficial port)	0.5.9-1+b2	166,3 kB	918,0 kB	[overzicht]
ppc64 (unofficial port)	0.29.0-1	1.092,6 kB	1.875,0 kB	[overzicht]
ppc64el	0.29.0-1	1.092,6 kB	1.875,0 kB	[overzicht]
riscv64 (unofficial port)	0.5.9-1	154,5 kB	703,0 kB	[overzicht]
sh4 (unofficial port)	0.5.9-1+b2	185,4 kB	846,0 kB	[overzicht]
sparc64 (unofficial port)	0.5.9-1+b1	161,6 kB	1.016,0 kB	[overzicht]
x32 (unofficial port)	0.14.1-1	101,3 kB	536,0 kB	[overzicht]