[ Bron: srst2 ]
Pakket: srst2 (0.2.0-11)
Verwijzigingen voor srst2
Debian bronnen:
Het bronpakket srst2 downloaden:
Beheerders:
- Debian Med Packaging Team (QA-pagina, Mailarchief)
- Andreas Tille (QA-pagina)
- Étienne Mollier (QA-pagina)
Externe bronnen:
- Homepage [katholt.github.io]
Vergelijkbare pakketten:
Short Read Sequence Typing for Bacterial Pathogens
This program is designed to take Illumina sequence data, a MLST database and/or a database of gene sequences (e.g. resistance genes, virulence genes, etc) and report the presence of STs and/or reference genes.
Andere aan srst2 gerelateerde pakketten
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- dep: bowtie2
- ultrafast memory-efficient short read aligner
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- dep: cd-hit
- suite of programs designed to quickly group sequences
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- rec: python3-rpy2
- Python3 interface to the GNU R language and environment (version 2)