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Pakket: libedlib0 (1.2.4-1)

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library for sequence alignment using edit distance

A lightweight and super fast C/C++ library for sequence alignment using edit distance.

Calculating edit distance of two strings is as simple as:

 edlibAlign("hello", 5, "world!", 6,
            edlibDefaultAlignConfig()).editDistance;
Features

 * Calculates edit distance (Levehnstein distance).
 * It can find optimal alignment path (instructions how to transform
   first sequence into the second sequence).
 * It can find just the start and/or end locations of alignment path -
   can be useful when speed is more important than having exact
   alignment path.
 * Supports multiple alignment methods: global(NW), prefix(SHW) and
   infix(HW), each of them useful for different scenarios.
 * You can extend character equality definition, enabling you to e.g.
   have wildcard characters, to have case insensitive alignment or to
   work with degenerate nucleotides.
 * It can easily handle small or very large sequences, even when finding
   alignment path, while consuming very little memory.
 * Super fast thanks to Myers's bit-vector algorithm.

This package contains the shared library.

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libedlib0 downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
alpha (unofficial port) 16,6 kB50,0 kB [overzicht]
amd64 15,7 kB45,0 kB [overzicht]
arm64 14,9 kB45,0 kB [overzicht]
armel 13,8 kB41,0 kB [overzicht]
armhf 13,7 kB37,0 kB [overzicht]
hppa (unofficial port) 16,7 kB46,0 kB [overzicht]
i386 16,4 kB49,0 kB [overzicht]
m68k (unofficial port) 15,1 kB49,0 kB [overzicht]
mips 15,8 kB46,0 kB [overzicht]
mips64el 15,6 kB46,0 kB [overzicht]
mipsel 16,0 kB46,0 kB [overzicht]
powerpcspe (unofficial port) 15,7 kB81,0 kB [overzicht]
ppc64 (unofficial port) 16,7 kB81,0 kB [overzicht]
ppc64el 17,8 kB81,0 kB [overzicht]
riscv64 (unofficial port) 14,5 kB37,0 kB [overzicht]
s390x 15,4 kB49,0 kB [overzicht]
sh4 (unofficial port) 17,7 kB41,0 kB [overzicht]
sparc64 (unofficial port) 13,8 kB42,0 kB [overzicht]
x32 (unofficial port) 15,0 kB45,0 kB [overzicht]